RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SRSF2Q01130 221 aaKnown RBP25.43■■□□□ 1.66
SSSCA1-207ENST00000533115 SNAPC1Q16533 368 aa25.43■■□□□ 1.66
SSSCA1-207ENST00000533115 C1orf87Q8N0U7 546 aa25.43■■□□□ 1.66
SSSCA1-207ENST00000533115 ZNF454Q8N9F8 522 aa25.43■■□□□ 1.66
SSSCA1-207ENST00000533115 ADAT1Q9BUB4 502 aaKnown RBP25.43■■□□□ 1.66
SSSCA1-207ENST00000533115 TMEM165Q9HC07 324 aa25.43■■□□□ 1.66
SSSCA1-207ENST00000533115 AP4S1Q9Y587 144 aa25.43■■□□□ 1.66
SSSCA1-207ENST00000533115 ARHGAP32A7KAX9 2087 aa25.43■■□□□ 1.66
SSSCA1-207ENST00000533115 LOC105371242A0A075B767 164 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 ZNF205O95201 554 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 LYNP07948 512 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 H2BFMP0C1H6 154 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 SLC2A5P22732 501 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 SEC61A1P61619 476 aaKnown RBP25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 RPS7P62081 194 aaKnown RBP25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 KRTAP24-1Q3LI83 254 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 PRAMEF6Q5VXH4 476 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 PRSS45Q7RTY3 260 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 OR56B2PQ8NGI1 322 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 Q8TCH9 128 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 THEM6Q8WUY1 208 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 DUS3LQ96G46 650 aaKnown RBP25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 DNAJC27Q9NZQ0 273 aa25.42■■□□□ 1.66
SSSCA1-207ENST00000533115 PPIAL4EA0A075B759 164 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 PPIAL4CA0A0B4J2A2 164 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 CEACAM18A8MTB9 384 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 PPIAL4DF5H284 164 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 TCF21O43680 179 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 FSTL3O95633 263 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 PPIAL4FP0DN26 164 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 IRF2P14316 349 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 FASP25445 335 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 ZNF121P58317 390 aaPredicted RBP25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 ESRRGP62508 458 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 SCGB2A2Q13296 93 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 PTGES3Q15185 160 aaKnown RBP25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 TIGD6Q17RP2 521 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 LIPNQ5VXI9 398 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 FAM57BQ71RH2 274 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 OR11L1Q8NGX0 322 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 SGK3Q96BR1 496 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 POLR3KQ9Y2Y1 108 aaPredicted RBP25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 STAB1Q9NY15 2570 aa25.41■■□□□ 1.66
SSSCA1-207ENST00000533115 G3V2T6 193 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 DDOSTP39656 456 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 NAA10P41227 235 aaPredicted RBP25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 APOFQ13790 326 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 MPPED2Q15777 294 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 SLC16A9Q7RTY1 509 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 HIST2H2ABQ8IUE6 130 aaPredicted RBP25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 OR52H1Q8NGJ2 320 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 REEP6Q96HR9 211 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 C7orf69Q9H7B7 122 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 KRT84Q9NSB2 600 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 UFSP2Q9NUQ7 469 aa25.4■■□□□ 1.66
SSSCA1-207ENST00000533115 A8MXK9 166 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 FAM20BO75063 409 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 PTBP3O95758 552 aaKnown RBP25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 WNT2P09544 360 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 CPT2P23786 658 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 FAM3AP98173 230 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 ESCO2Q56NI9 601 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 FAM201AQ5SY85 155 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 C1QL2Q7Z5L3 287 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 KLBQ86Z14 1044 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 SPERTQ8NA61 448 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 DVL3Q92997 716 aaPredicted RBP25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 OR10A2Q9H208 303 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 OCEL1Q9H607 264 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 PPIAL4AQ9Y536 164 aa25.39■■□□□ 1.66
SSSCA1-207ENST00000533115 ZNF404Q494X3 552 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 ZDHHC13Q8IUH4 622 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 PLPP7Q8NBV4 271 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 TMEM246Q9BRR3 403 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 FN3KRPQ9HA64 309 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 BRD7Q9NPI1 651 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 MMP26Q9NRE1 261 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 ZNF319Q9P2F9 582 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 MIOXQ9UGB7 285 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 OPN4Q9UHM6 478 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 LRCH1Q9Y2L9 728 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 KLHDC2Q9Y2U9 406 aa25.38■■□□□ 1.65
SSSCA1-207ENST00000533115 TRAPPC2LH3BP13 241 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 MITFO75030 526 aaPredicted RBP25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 CIB2O75838 187 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 FCGR1AP12314 374 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 RPS2P15880 293 aaKnown RBP25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 CFL1P23528 166 aaKnown RBP25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 AMIGO2Q86SJ2 522 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 LRTOMTQ8WZ04 291 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 PGAM5Q96HS1 289 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 TEAD3Q99594 435 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 PRRG3Q9BZD7 231 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 GABARAPL1Q9H0R8 117 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 LAMP5Q9UJQ1 280 aa25.37■■□□□ 1.65
SSSCA1-207ENST00000533115 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 hCG_38984A0A1B0GV85 526 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 ANKRD30BLA7E2S9 258 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 ADRA2CP18825 462 aa25.36■■□□□ 1.65
SSSCA1-207ENST00000533115 ALOX5APP20292 161 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms