RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	DIRAS1	O95057	198 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	GADD45G	O95257	159 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	IGHV1-69	P01742	117 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	IGHV4-59	P01825	116 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	H1F0	P07305	194 aa	Known RBP	10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	IRF2	P14316	349 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	PSMB10	P40306	273 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	HTR5A	P47898	357 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	KCNJ8	Q15842	424 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	FAM189A2	Q15884	450 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	C11orf91	Q3C1V1	193 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	METTL11B	Q5VVY1	283 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	HS3ST5	Q8IZT8	346 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	PNLDC1	Q8NA58	520 aa	Known RBP	10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	ATG16L2	Q8NAA4	619 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	OR8G5	Q8NG78	346 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	OR10AD1	Q8NGE0	317 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	OR13G1	Q8NGZ3	307 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	FBLIM1	Q8WUP2	373 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	PTP4A1	Q93096	173 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	ERGIC1	Q969X5	290 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	WDFY2	Q96P53	400 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	RBP7	Q96R05	134 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	GABARAPL3	Q9BY60	117 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	TXNIP	Q9H3M7	391 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	POFUT1	Q9H488	388 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	MEPE	Q9NQ76	525 aa	Predicted RBP	10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	ATPIF1	Q9UII2	106 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	A4GNT	Q9UNA3	340 aa		10.31	□□□□□ -0.76
CAPN1-223	ENST00000533079	TET2	Q6N021	2002 aa	Predicted RBP	10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	C22orf46	C9J442	243 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	CCNB2	O95067	398 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	SFTPB	P07988	381 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	GNAO1	P09471	354 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	TNFRSF1B	P20333	461 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	IFNA8	P32881	189 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	RBMX	P38159	391 aa	Known RBP	10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	GATA4	P43694	442 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	RGS6	P49758	472 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	LOXL3	P58215	753 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	CXCR4	P61073	352 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	ISL1	P61371	349 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	SPIB	Q01892	262 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	COX10	Q12887	443 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	TOP3A	Q13472	1001 aa	Predicted RBP	10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	ENDOG	Q14249	297 aa	Known RBP	10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	VAX1	Q5SQQ9	334 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	ZNF691	Q5VV52	312 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	C11orf88	Q6PI97	169 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	CD300LD	Q6UXZ3	194 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	FBXW12	Q6X9E4	464 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	ZNF841	Q6ZN19	808 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079		Q6ZTK2	550 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	CELF2-AS1	Q8N7Q2	184 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	SCCPDH	Q8NBX0	429 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	SETD9	Q8NE22	299 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	OR10G2	Q8NGC3	310 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	OR4D11	Q8NGI4	311 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	RASD2	Q96D21	266 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	PRRC1	Q96M27	445 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	TECTB	Q96PL2	329 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	TBX15	Q96SF7	602 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	FEV	Q99581	238 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	PITX2	Q99697	317 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	MRPS26	Q9BYN8	205 aa	Known RBP	10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	KRT84	Q9NSB2	600 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	NDUFA13	Q9P0J0	144 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	VPREB3	Q9UKI3	123 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	TMCC3	Q9ULS5	477 aa		10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079	CAB39	Q9Y376	341 aa	Predicted RBP	10.3	□□□□□ -0.76
CAPN1-223	ENST00000533079		A0A1B0GWJ7	208 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079		A0A1W2PPL8	197 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079		J3KTA2	159 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	SGCE	O43556	437 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	ZNF205	O95201	554 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	FUT1	P19526	365 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	TGFBR2	P37173	567 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	AQP2	P41181	271 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	GTF2A1	P52655	376 aa	Predicted RBP	10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	CSNK2B	P67870	215 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	PPP1R8	Q12972	351 aa	Known RBP	10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	APOF	Q13790	326 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	HERPUD1	Q15011	391 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	ZIK1	Q3SY52	487 aa	Predicted RBP	10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	ALG10	Q5BKT4	473 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	RBM48	Q5RL73	367 aa	Known RBP	10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	MOGAT3	Q86VF5	341 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	OFCC1	Q8IZS5	231 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	CLDN22	Q8N7P3	220 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	OR5L1	Q8NGL2	311 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079		Q8TCH9	128 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	SGTB	Q96EQ0	304 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	HRASLS5	Q96KN8	279 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	ZNF582	Q96NG8	517 aa	Predicted RBP	10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	PRSS27	Q9BQR3	290 aa		10.29	□□□□□ -0.76
CAPN1-223	ENST00000533079	DGCR6L	Q9BY27	220 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms