RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 C4orf36Q96KX1 117 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 VRK1Q99986 396 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 ZNF649Q9BS31 505 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 RHNO1Q9BSD3 238 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 REPIN1Q9BWE0 567 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 RAB1BQ9H0U4 201 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 MOB1AQ9H8S9 216 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 ACOXLQ9NUZ1 547 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 FKBP14Q9NWM8 211 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 ZNF319Q9P2F9 582 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 MYEF2Q9P2K5 600 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 CGGBP1Q9UFW8 167 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 ZNF391Q9UJN7 358 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 CAB39Q9Y376 341 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 LRBAP50851 2863 aa9.62□□□□□ -0.87
TRAPPC4-211ENST00000533012 FLNBO75369 2602 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 TACC2O95359 2948 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 A0A0U1RQV5 110 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 CD300LBA8K4G0 201 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 H7C417 338 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 SRSF10O75494 262 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 CDK1P06493 297 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 LIMS3P0CW19 117 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 LIMS4P0CW20 117 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 NAT2P11245 290 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 CRHBPP24387 322 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 C21orf33P30042 268 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 CDKN1AP38936 164 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 DDOSTP39656 456 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 PSMB10P40306 273 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 PPOXP50336 477 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 GBX2P52951 348 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 MVKQ03426 396 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 MFGE8Q08431 387 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 DYNC1I2Q13409 638 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 GFOD2Q3B7J2 385 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 ALKBH6Q3KRA9 238 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 ZMAT1Q5H9K5 638 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 ELMOD2Q8IZ81 293 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 KLHL36Q8N4N3 616 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 OR2AE1Q8NHA4 323 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 HAVCR2Q8TDQ0 301 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 ITFG2Q969R8 447 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 PPP1R14AQ96A00 147 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 DUSP21Q9H596 190 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 ISG20L2Q9H9L3 353 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 G6PC2Q9NQR9 355 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 ZNF701Q9NV72 531 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 RSL24D1Q9UHA3 163 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 NUFIP1Q9UHK0 495 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 CLEC2DQ9UHP7 191 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 ERGIC3Q9Y282 383 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 PCDHGB5Q9Y5G0 923 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 HEATR1Q9H583 2144 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 ABCA4P78363 2273 aa9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 HRNRQ86YZ3 2850 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC4-211ENST00000533012 CADP27708 2225 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 IQCF6A8MYZ5 107 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 HTR1AP08908 422 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 PAX1P15863 534 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 ANOS1P23352 680 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 ZNF81P51508 661 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 MMP15P51511 669 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 ATP5J2P56134 94 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 SLC35A2P78381 396 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 FAM3AP98173 230 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 CNPY1Q3B7I2 92 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 TMEM255AQ5JRV8 349 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 RNLSQ5VYX0 342 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 FDX2Q6P4F2 183 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 COMMD2Q86X83 199 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 CATSPERDQ86XM0 798 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 OR5AS1Q8N127 324 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 LRRC75A-AS1Q8N1F1 130 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 ZCCHC24Q8N2G6 241 aaKnown RBP9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 OR8G5Q8NG78 346 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 OR13G1Q8NGZ3 307 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 OR52N1Q8NH53 320 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 OR51E1Q8TCB6 317 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 PELI1Q96FA3 418 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 DIRC2Q96SL1 478 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 GSX2Q9BZM3 304 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 TMEM100Q9NV29 134 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 BABAM2Q9NXR7 383 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 ZDHHC8Q9ULC8 765 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 SLC22A13Q9Y226 551 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 APCP25054 2843 aa9.6□□□□□ -0.87
TRAPPC4-211ENST00000533012 ANKRD30BLA7E2S9 258 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 C17orf100A8MU93 164 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 MYL12BO14950 172 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 SPRY3O43610 288 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 RGS10O43665 173 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 MTRF1O75570 445 aaKnown RBP9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 F12P00748 615 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 TTRP02766 147 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 JUNBP17275 347 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 MAP2K3P46734 347 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 PTH2RP49190 550 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 GSK3AP49840 483 aa9.59□□□□□ -0.87
TRAPPC4-211ENST00000533012 CCR9P51686 369 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms