RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 EFNB1P98172 346 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 LCN1P1Q5VSP4 162 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 IL17RELQ6ZVW7 336 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 SLC16A9Q7RTY1 509 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 PRSS45Q7RTY3 260 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 GLCCI1Q86VQ1 547 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.96□□□□□ -0.33
CPSF1-210ENST00000532935 TCEANCQ8N8B7 351 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 SPSB4Q96A44 273 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 SIGLEC11Q96RL6 698 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 PKP2Q99959 881 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 GAL3ST1Q99999 423 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 YIPF3Q9GZM5 350 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 LAMP5Q9UJQ1 280 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 DOCK11Q5JSL3 2073 aa12.96□□□□□ -0.33
CPSF1-210ENST00000532935 ATRQ13535 2644 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 IGHV3-64DA0A0J9YX35 117 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 KIAA1324LA8MWY0 1029 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-210ENST00000532935 H0YJX3 145 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 TMEM178BH3BS89 294 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 MRPL3P09001 348 aaKnown RBP12.95□□□□□ -0.34
CPSF1-210ENST00000532935 SBK2P0C263 348 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 ALOX5APP20292 161 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 CA6P23280 308 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 HCCSP53701 268 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 RAD23AP54725 363 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 TIGD6Q17RP2 521 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 OGFRL1Q5TC84 451 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-210ENST00000532935 FAM57BQ71RH2 274 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 BCDIN3DQ7Z5W3 292 aaKnown RBP12.95□□□□□ -0.34
CPSF1-210ENST00000532935 MOGAT3Q86VF5 341 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 CELF2-AS1Q8N7Q2 184 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 OR52H1Q8NGJ2 320 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 OR51F2Q8NH61 342 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 ZNF420Q8TAQ5 688 aaPredicted RBP12.95□□□□□ -0.34
CPSF1-210ENST00000532935 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 NRG4Q8WWG1 115 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 TMEM186Q96B77 213 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 REEP6Q96HR9 211 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 RBM4BQ9BQ04 359 aaKnown RBP12.95□□□□□ -0.34
CPSF1-210ENST00000532935 OSBPL10Q9BXB5 764 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 GABARAPL3Q9BY60 117 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 SLC22A4Q9H015 551 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 OR10A2Q9H208 303 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 BRD7Q9NPI1 651 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 HIF1ANQ9NWT6 349 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 UBAP1Q9NZ09 502 aa12.95□□□□□ -0.34
CPSF1-210ENST00000532935 MRPL15Q9P015 296 aaKnown RBP12.95□□□□□ -0.34
CPSF1-210ENST00000532935 NOP16Q9Y3C1 178 aaKnown RBP12.95□□□□□ -0.34
CPSF1-210ENST00000532935 GMDSO60547 372 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 PCMT1P22061 227 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 POLR2IP36954 125 aaKnown RBP12.94□□□□□ -0.34
CPSF1-210ENST00000532935 CD200P41217 278 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 BTG1P62324 171 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 MAB21L1Q13394 359 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 OR8G1Q15617 311 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 AADACL4Q5VUY2 407 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 NXNL2Q5VZ03 156 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 LRRN1Q6UXK5 716 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 MEPCEQ7L2J0 689 aaKnown RBP12.94□□□□□ -0.34
CPSF1-210ENST00000532935 KRT77Q7Z794 578 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 OR56B2PQ8NGI1 322 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 SGK3Q96BR1 496 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 PGAM5Q96HS1 289 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 IL4I1Q96RQ9 567 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 CNN2Q99439 309 aaKnown RBP12.94□□□□□ -0.34
CPSF1-210ENST00000532935 ADAT1Q9BUB4 502 aaKnown RBP12.94□□□□□ -0.34
CPSF1-210ENST00000532935 VCXQ9H320 206 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 RIBC2Q9H4K1 309 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-210ENST00000532935 ZNF319Q9P2F9 582 aa12.94□□□□□ -0.34
CPSF1-210ENST00000532935 FBN1P35555 2871 aaKnown RBP12.93□□□□□ -0.34
CPSF1-210ENST00000532935 TRAV20A0A0B4J274 112 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 SLC22A31A6NKX4 558 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 CYB5R3P00387 301 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-210ENST00000532935 IFNA2P01563 188 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 SRD5A1P18405 259 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 CFL1P23528 166 aaKnown RBP12.93□□□□□ -0.34
CPSF1-210ENST00000532935 DDOSTP39656 456 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 PMELP40967 661 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 GATA4P43694 442 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 FAM3AP98173 230 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 ZNF181Q2M3W8 571 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 GFOD2Q3B7J2 385 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 TMEM155Q4W5P6 130 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 LRRC28Q86X40 367 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-210ENST00000532935 GID4Q8IVV7 300 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 SPICQ8N5J4 248 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 ZNF184Q99676 751 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-210ENST00000532935 NIPAL2Q9H841 368 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 COPS3Q9UNS2 423 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 LRP12Q9Y561 859 aa12.93□□□□□ -0.34
CPSF1-210ENST00000532935 hCG_38984A0A1B0GV85 526 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 LRRC30A6NM36 301 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 PLPP2O43688 288 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 ALPLP05186 524 aa12.92□□□□□ -0.34
CPSF1-210ENST00000532935 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
CPSF1-210ENST00000532935 HSPA13P48723 471 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms