RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 COPS4Q9BT78 406 aa14.89□□□□□ -0.03
SMG1-203ENST00000532700 CENPMQ9NSP4 180 aa14.89□□□□□ -0.03
SMG1-203ENST00000532700 ENOPH1Q9UHY7 261 aa14.89□□□□□ -0.03
SMG1-203ENST00000532700 KLHDC2Q9Y2U9 406 aa14.89□□□□□ -0.03
SMG1-203ENST00000532700 INSIG2Q9Y5U4 225 aa14.89□□□□□ -0.03
SMG1-203ENST00000532700 FOXH1O75593 365 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 ZNF3P17036 446 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 FMO3P31513 532 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 CD80P33681 288 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 CD200P41217 278 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 GATA4P43694 442 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 DAPP51397 102 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 HILS1P60008 231 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 GINS1Q14691 196 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 ZNF404Q494X3 552 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 PRSS45Q7RTY3 260 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 MRPL21Q7Z2W9 205 aaKnown RBP14.88□□□□□ -0.03
SMG1-203ENST00000532700 DPY19L4Q7Z388 723 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 WDR86Q86TI4 376 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 KLBQ86Z14 1044 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 PARP8Q8N3A8 854 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 ZDHHC22Q8N966 263 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 BBS1Q8NFJ9 593 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 OR56B2PQ8NGI1 322 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 OSBPL10Q9BXB5 764 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 GABARAPL1Q9H0R8 117 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 KRT84Q9NSB2 600 aa14.88□□□□□ -0.03
SMG1-203ENST00000532700 PPIAL4EA0A075B759 164 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 IGHV3OR16-10A0A075B7F0 116 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 PPIAL4CA0A0B4J2A2 164 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 PPIAL4DF5H284 164 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 H3BNX3 289 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 SELENOFO60613 162 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 PPIAL4FP0DN26 164 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 PAICSP22234 425 aaKnown RBP14.87□□□□□ -0.03
SMG1-203ENST00000532700 CRISP1P54107 249 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 ESRRGP62508 458 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 ELF3P78545 371 aaPredicted RBP14.87□□□□□ -0.03
SMG1-203ENST00000532700 CDK5Q00535 292 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 EIF2B1Q14232 305 aaKnown RBP14.87□□□□□ -0.03
SMG1-203ENST00000532700 ZNF181Q2M3W8 571 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 KLHL12Q53G59 568 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 TEX30Q5JUR7 227 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 TMEM236Q5W0B7 351 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 DRAM2Q6UX65 266 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 ZNF826PQ6ZT77 177 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 ERI1Q8IV48 349 aaKnown RBP14.87□□□□□ -0.03
SMG1-203ENST00000532700 TIGD4Q8IY51 512 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 STMN2Q93045 179 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 SPTSSAQ969W0 71 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 ZMYND19Q96E35 227 aaPredicted RBP14.87□□□□□ -0.03
SMG1-203ENST00000532700 ZNF48Q96MX3 618 aaPredicted RBP14.87□□□□□ -0.03
SMG1-203ENST00000532700 KCNJ15Q99712 375 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 ADAT1Q9BUB4 502 aaKnown RBP14.87□□□□□ -0.03
SMG1-203ENST00000532700 ABHD6Q9BV23 337 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 MARCH7Q9H992 704 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 S100A14Q9HCY8 104 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 CTSZQ9UBR2 303 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 ZNF69Q9UC07 566 aa14.87□□□□□ -0.03
SMG1-203ENST00000532700 ZNF878C9JN71 531 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 RPS2P15880 293 aaKnown RBP14.86□□□□□ -0.03
SMG1-203ENST00000532700 CX3CR1P49238 355 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 MALLQ13021 153 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 OR8G1Q15617 311 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 KDM4DQ6B0I6 523 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 PLBD1Q6P4A8 553 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 ZNF841Q6ZN19 808 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 OR6N2Q8NGY6 317 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 NANPQ8TBE9 248 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 Q8TCH9 128 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 SPRYD4Q8WW59 207 aaPredicted RBP14.86□□□□□ -0.03
SMG1-203ENST00000532700 OTULINQ96BN8 352 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 PLEKHA8Q96JA3 519 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 C1orf147Q96MC9 270 aaPredicted RBP14.86□□□□□ -0.03
SMG1-203ENST00000532700 PKP2Q99959 881 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 SLC25A19Q9HC21 320 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 DNAJC27Q9NZQ0 273 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 OAZ3Q9UMX2 235 aa14.86□□□□□ -0.03
SMG1-203ENST00000532700 PTBP3O95758 552 aaKnown RBP14.85□□□□□ -0.03
SMG1-203ENST00000532700 IGHV4-38-2P0DP08 117 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 EGR1P18146 543 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 GATA3P23771 443 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 BLVRAP53004 296 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 PAX8Q06710 450 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 ESCO2Q56NI9 601 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 SFRP4Q6FHJ7 346 aaPredicted RBP14.85□□□□□ -0.03
SMG1-203ENST00000532700 MUC20Q8N307 709 aaPredicted RBP14.85□□□□□ -0.03
SMG1-203ENST00000532700 ZNF418Q8TF45 676 aaPredicted RBP14.85□□□□□ -0.03
SMG1-203ENST00000532700 RNF133Q8WVZ7 376 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 TAF15Q92804 592 aaKnown RBP eCLIP14.85□□□□□ -0.03
SMG1-203ENST00000532700 SPSB4Q96A44 273 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 SGK3Q96BR1 496 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 DUX5Q96PT3 197 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 INTS14Q96SY0 518 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 RBM4BQ9BQ04 359 aaKnown RBP14.85□□□□□ -0.03
SMG1-203ENST00000532700 SSBP3Q9BWW4 388 aaPredicted RBP14.85□□□□□ -0.03
SMG1-203ENST00000532700 PRRG3Q9BZD7 231 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 OR51V1Q9H2C8 321 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 PPIAL4AQ9Y536 164 aa14.85□□□□□ -0.03
SMG1-203ENST00000532700 AUP1Q9Y679 476 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms