RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 PRSS45Q7RTY3 260 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 OR2Z1Q8NG97 314 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 OR13G1Q8NGZ3 307 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 FAM81AQ8TBF8 368 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 SPSB4Q96A44 273 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 SLC30A2Q9BRI3 323 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 REPIN1Q9BWE0 567 aaKnown RBP12.76□□□□□ -0.37
CPSF1-208ENST00000532560 NIPAL2Q9H841 368 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 SP140LQ9H930 580 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 WARS2Q9UGM6 360 aaKnown RBP12.76□□□□□ -0.37
CPSF1-208ENST00000532560 TMEM14AQ9Y6G1 99 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 TANC2Q9HCD6 1990 aa12.76□□□□□ -0.37
CPSF1-208ENST00000532560 CDC14BO60729 498 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 ABCA1O95477 2261 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 ANXA2P07355 339 aaKnown RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 JUNBP17275 347 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 TNFRSF1AP19438 455 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 GPR6P46095 362 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 ZNF121P58317 390 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 GABARAPL2P60520 117 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 PSMA6P60900 246 aaKnown RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 POU4F2Q12837 409 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 HFEQ30201 348 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 KCTD18Q6PI47 426 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 Q71RC1 249 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 BHLHE23Q8NDY6 225 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 ZNF555Q8NEP9 628 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 OR52H1Q8NGJ2 320 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 OR2AE1Q8NHA4 323 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 TRUB1Q8WWH5 349 aaKnown RBP12.75□□□□□ -0.37
CPSF1-208ENST00000532560 ASB17Q8WXJ9 295 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 MBOAT4Q96T53 435 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 MNTQ99583 582 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 ADGRL4Q9HBW9 690 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 IMPAD1Q9NX62 359 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 IL19Q9UHD0 177 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 TLN2Q9Y4G6 2542 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 LRP12Q9Y561 859 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 NF1P21359 2839 aa12.75□□□□□ -0.37
CPSF1-208ENST00000532560 YLPM1P49750 1951 aaKnown RBP12.74□□□□□ -0.37
CPSF1-208ENST00000532560 CD300LBA8K4G0 201 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 CLDN25C9JDP6 229 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 PPIHO43447 177 aaKnown RBP12.74□□□□□ -0.37
CPSF1-208ENST00000532560 IGHV4-31P0DP07 118 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 HTR1FP30939 366 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 PRSS12P56730 875 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 ROM1Q03395 351 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 TMED1Q13445 227 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 ZIK1Q3SY52 487 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-208ENST00000532560 SPRNQ5BIV9 151 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 SLC25A30Q5SVS4 291 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 DEGS2Q6QHC5 323 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 LRRN1Q6UXK5 716 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 THAP5Q7Z6K1 395 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 KRT77Q7Z794 578 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 SLC35F2Q8IXU6 374 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 C8orf59Q8N0T1 100 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-208ENST00000532560 OR10AD1Q8NGE0 317 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 SPRYD4Q8WW59 207 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-208ENST00000532560 HPS1Q92902 700 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 OR2V2Q96R30 315 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 OR10A2Q9H208 303 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 DNAJC27Q9NZQ0 273 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 COPS3Q9UNS2 423 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 CACNG2Q9Y698 323 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 HSPE1-MOB4S4R3N1 261 aa12.74□□□□□ -0.37
CPSF1-208ENST00000532560 NSD1Q96L73 2696 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-208ENST00000532560 LRP5LA4QPB2 252 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 GGT3PA6NGU5 568 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 PHYHO14832 338 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 MLNRO43193 412 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 TBX1O43435 398 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 NOL3O60936 208 aaKnown RBP12.73□□□□□ -0.37
CPSF1-208ENST00000532560 SBK2P0C263 348 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 CFL1P23528 166 aaKnown RBP12.73□□□□□ -0.37
CPSF1-208ENST00000532560 DCTDP32321 178 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 GZMKP49863 264 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 HCCSP53701 268 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 SNRPGP62308 76 aaKnown RBP12.73□□□□□ -0.37
CPSF1-208ENST00000532560 SLC3A1Q07837 685 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 TIGD6Q17RP2 521 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 CYB5R2Q6BCY4 276 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 ZNF773Q6PK81 442 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 FAM57BQ71RH2 274 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 CROCCP3Q8IVE0 287 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 ZNF679Q8IYX0 411 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 ITLN1Q8WWA0 313 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 CCL17Q92583 94 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 RFKQ969G6 155 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 TIMD4Q96H15 378 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 REEP6Q96HR9 211 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 OR8B4Q96RC9 309 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 MROQ9BYG7 248 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 SLC22A4Q9H015 551 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 RGCCQ9H4X1 137 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 TMEM100Q9NV29 134 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 CLN6Q9NWW5 311 aa12.73□□□□□ -0.37
CPSF1-208ENST00000532560 MRPL15Q9P015 296 aaKnown RBP12.73□□□□□ -0.37
CPSF1-208ENST00000532560 NOP16Q9Y3C1 178 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms