RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 OR2F1Q13607 317 aa9.7□□□□□ -0.86
CHEK1-213ENST00000532449 HFEQ30201 348 aa9.7□□□□□ -0.86
CHEK1-213ENST00000532449 MIDNQ504T8 468 aa9.7□□□□□ -0.86
CHEK1-213ENST00000532449 SDSLQ96GA7 329 aa9.7□□□□□ -0.86
CHEK1-213ENST00000532449 NUDT9Q9BW91 350 aa9.7□□□□□ -0.86
CHEK1-213ENST00000532449 MRPS18AQ9NVS2 196 aaKnown RBP9.7□□□□□ -0.86
CHEK1-213ENST00000532449 RNASEK-C17orf49H0YIS7 233 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 LINC01565O15544 149 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 PHF1O43189 567 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 LILRB3O75022 631 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 ONECUT2O95948 504 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 HEXBP07686 556 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 PET100P0DJ07 73 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 C21orf62-AS1Q17RA5 79 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 ZNF611Q8N823 705 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 TSTD1Q8NFU3 115 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 SLC26A10Q8NG04 563 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 TTC9Q92623 222 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 FRZBQ92765 325 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 DMRTA2Q96SC8 542 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 HDHD3Q9BSH5 251 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 SMCO4Q9NRQ5 59 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 GPR173Q9NS66 373 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 LRFN1Q9P244 771 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 MYO7BQ6PIF6 2116 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 VWA8A3KMH1 1905 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 C9orf170A2RU37 121 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 PRSS37A4D1T9 235 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 SPRY1O43609 319 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 SLC34A2O95436 690 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 ACAA2P42765 397 aaKnown RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 OR3A4PP47883 348 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 MTCP1P56278 107 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 RPL27P61353 136 aaKnown RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 NKX6-1P78426 367 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 SGCBQ16585 318 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 NPSR1Q6W5P4 371 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 HOXB13Q92826 284 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 DAZLQ92904 295 aaKnown RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 PRRG4Q9BZD6 226 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 CRLF2Q9HC73 371 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 EXOSC3Q9NQT5 275 aaKnown RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 TLX3O43711 291 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 HLA-HP01893 362 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 CRABP1P29762 137 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 TAGLN2P37802 199 aaKnown RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 GLP1RP43220 463 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 F2RL1P55085 397 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 UEVLDQ8IX04 471 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 GPR137CQ8N3F9 429 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 BMPERQ8N8U9 685 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 OTOSQ8NHW6 89 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 PIGCQ92535 297 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 HAS2Q92819 552 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 SLAMF6Q96DU3 332 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 ZNF845Q96IR2 970 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 UBL7Q96S82 380 aaPredicted RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 PAPOLGQ9BWT3 736 aaKnown RBP9.69□□□□□ -0.86
CHEK1-213ENST00000532449 HDAC8Q9BY41 377 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 NELFAQ9H3P2 528 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 OR5AC2Q9NZP5 309 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 GHRLQ9UBU3 117 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 SIP14410 1827 aa9.69□□□□□ -0.86
CHEK1-213ENST00000532449 LINC01553A4QN01 128 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 MSGN1A6NI15 193 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 HNRNPA1P09651 372 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHEK1-213ENST00000532449 RPL12P30050 165 aaKnown RBP9.68□□□□□ -0.86
CHEK1-213ENST00000532449 KIR3DL2P43630 455 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 CLDN17P56750 224 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 RHEBQ15382 184 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 SLC25A30Q5SVS4 291 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 LCN15Q6UWW0 184 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 SPICQ8N5J4 248 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 TEX101Q9BY14 249 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 ZNF304Q9HCX3 659 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 UQCC1Q9NVA1 299 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 EMC3Q9P0I2 261 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 KLK13Q9UKR3 277 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 LINC00587B1AMM8 73 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 IL5P05113 134 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 COL9A1P20849 921 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 G0S2P27469 103 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 AFF3P51826 1226 aaKnown RBP9.68□□□□□ -0.86
CHEK1-213ENST00000532449 RPS11P62280 158 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHEK1-213ENST00000532449 CYCSP99999 105 aaKnown RBP9.68□□□□□ -0.86
CHEK1-213ENST00000532449 ZNF117Q03924 483 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 CYB5R2Q6BCY4 276 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 C6orf201Q7Z4U5 140 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 PRSS35Q8N3Z0 413 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 OR5M8Q8NGP6 311 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 MRPL38Q96DV4 380 aaKnown RBP9.68□□□□□ -0.86
CHEK1-213ENST00000532449 RHOVQ96L33 236 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 SOX7Q9BT81 388 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 SERINC1Q9NRX5 453 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 PHOX2AO14813 284 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 GP1BAP07359 652 aa9.68□□□□□ -0.86
CHEK1-213ENST00000532449 MUC1P15941 1255 aaPredicted RBP9.68□□□□□ -0.86
CHEK1-213ENST00000532449 MECP2P51608 486 aaKnown RBP9.68□□□□□ -0.86
CHEK1-213ENST00000532449 SKP2Q13309 424 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms