RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SCRN3Q0VDG4 424 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 CAMK2DQ13557 499 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 MPPED2Q15777 294 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 PCGF3Q3KNV8 242 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 ACTBL2Q562R1 376 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 FAM27BQ5VT28 67 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 PRAMEF20Q5VT98 475 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 ABLIM2Q6H8Q1 611 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 GLDNQ6ZMI3 551 aaPredicted RBP4.9□□□□□ -1.63
PCF11-205ENST00000530906 UTS2BQ765I0 119 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.9□□□□□ -1.63
PCF11-205ENST00000530906 LINC00346Q8IVM7 164 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 NAXDQ8IW45 347 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 C20orf196Q8IYI0 205 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 GPR137CQ8N3F9 429 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 JAGN1Q8N5M9 183 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 PNLDC1Q8NA58 520 aaKnown RBP4.9□□□□□ -1.63
PCF11-205ENST00000530906 CLEC1AQ8NC01 280 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 OR10S1Q8NGN2 331 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 OR2V1Q8NHB1 315 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 KCNG3Q8TAE7 436 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 CPT1CQ8TCG5 803 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 GIMAP1Q8WWP7 306 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 SPTSSAQ969W0 71 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 FAM46BQ96A09 425 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 CPNE4Q96A23 557 aaPredicted RBP4.9□□□□□ -1.63
PCF11-205ENST00000530906 TMEM45BQ96B21 275 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 TECTBQ96PL2 329 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 FYTTD1Q96QD9 318 aaKnown RBP4.9□□□□□ -1.63
PCF11-205ENST00000530906 FAM173AQ9BQD7 235 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 MESP1Q9BRJ9 268 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 TMEM246Q9BRR3 403 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 EMC6Q9BV81 110 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 ATG5Q9H1Y0 275 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 ARRDC1-AS1Q9H2J1 176 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 RGCCQ9H4X1 137 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 SEC61A2Q9H9S3 476 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 NOX3Q9HBY0 568 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 PROK2Q9HC23 129 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 P4HTMQ9NXG6 502 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 SLC2A8Q9NY64 477 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 ASH2LQ9UBL3 628 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 KLK11Q9UBX7 282 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 KIAA1549Q9HCM3 1950 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 SDK1Q7Z5N4 2213 aa4.9□□□□□ -1.63
PCF11-205ENST00000530906 TNRC18O15417 2968 aaPredicted RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 TRAV6A0A075B6T7 132 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 IGKV3D-15A0A087WSY6 115 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 A0A1B0GTI1 187 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 A0A1B0GVC2 190 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 A6NIN4 97 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 TMEM14DPA8MWL7 114 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 DISC1C4P0D8 188 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 H0YC42 278 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 P2RY10O00398 339 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 SSNA1O43805 119 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 LRP3O75074 770 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 DHRS3O75911 302 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 OR2A4O95047 310 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 MT-CO3P00414 261 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ZNF806P0C7X5 589 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 GSTT2P0CG29 244 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 CD59P13987 128 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 PRF1P14222 555 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ZNF24P17028 368 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 OTX2P32243 289 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ZNF93P35789 620 aaPredicted RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 MAGEB1P43366 347 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 KIR2DL2P43627 348 aaPredicted RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 CX3CR1P49238 355 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 CCR6P51684 374 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 CARD18P57730 90 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ZNF121P58317 390 aaPredicted RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 KRTAP10-2P60368 255 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 UBE2MP61081 183 aaKnown RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 IFITM2Q01629 132 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 PMPCAQ10713 525 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 AIMP2Q13155 320 aaKnown RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 MADCAM1Q13477 382 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 GK2Q14410 553 aaPredicted RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 PPA1Q15181 289 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 RAB35Q15286 201 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 FCN2Q15485 313 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 PNLIPRP3Q17RR3 467 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ODF4Q2M2E3 257 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ABHD17BQ5VST6 288 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ZNF626Q68DY1 528 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ASPHD2Q6ICH7 369 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 STEAP1BQ6NZ63 245 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 LPCAT3Q6P1A2 487 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 FAHD2BQ6P2I3 314 aaPredicted RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 DRAM2Q6UX65 266 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 CFAP77Q6ZQR2 320 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 PRSS45Q7RTY3 260 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ABHD12BQ7Z5M8 362 aaPredicted RBP4.89□□□□□ -1.63
PCF11-205ENST00000530906 DPPA2Q7Z7J5 298 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 GLRX5Q86SX6 157 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ZNF584Q8IVC4 421 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 IZUMO1Q8IYV9 350 aa4.89□□□□□ -1.63
PCF11-205ENST00000530906 ZNF283Q8N7M2 679 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms