RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 PELI1Q96FA3 418 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 PGAM5Q96HS1 289 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 CDCA4Q9BXL8 241 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 CXorf56Q9H5V9 222 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 ISG20L2Q9H9L3 353 aaKnown RBP13.71□□□□□ -0.21
BRK1-201ENST00000530758 CYSLTR2Q9NS75 346 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 ACOXLQ9NUZ1 547 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 PAK1IP1Q9NWT1 392 aaPredicted RBP13.71□□□□□ -0.21
BRK1-201ENST00000530758 GNG8Q9UK08 70 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 OR52A1Q9UKL2 312 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 PLEKHA6Q9Y2H5 1048 aa13.71□□□□□ -0.21
BRK1-201ENST00000530758 F8P00451 2351 aa13.71□□□□□ -0.22
BRK1-201ENST00000530758 LOC110117498-PIK3R3F6TDL0 507 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 J3QLW9 94 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 TTRP02766 147 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 ZNF19P17023 458 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 MYL12AP19105 171 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 DDOSTP39656 456 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 CCR9P51686 369 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 FAM3AP98173 230 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 MFGE8Q08431 387 aaPredicted RBP13.7□□□□□ -0.22
BRK1-201ENST00000530758 ALKBH6Q3KRA9 238 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 AHSA2Q719I0 299 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 STX19Q8N4C7 294 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 PLPP7Q8NBV4 271 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 OR52N1Q8NH53 320 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 OR2AE1Q8NHA4 323 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 REEP6Q96HR9 211 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 C4orf36Q96KX1 117 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 BRD7Q9NPI1 651 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 TAAR3PQ9P1P4 343 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 CLEC2DQ9UHP7 191 aa13.7□□□□□ -0.22
BRK1-201ENST00000530758 hCG_38984A0A1B0GV85 526 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 LOC390937A0A1W2PQ73 354 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 PTGES3LE9PB15 166 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 M0R233 179 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 TBX1O43435 398 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 TGM4P49221 684 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 IRF3Q14653 427 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 OR8B8Q15620 311 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 TIGD6Q17RP2 521 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 DEFB113Q30KQ7 82 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 CCDC58Q4VC31 144 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 TMPRSS11AQ6ZMR5 421 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 MRPL21Q7Z2W9 205 aaKnown RBP13.69□□□□□ -0.22
BRK1-201ENST00000530758 PRSS35Q8N3Z0 413 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 KLHL36Q8N4N3 616 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 NANOGP1Q8N7R0 232 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 OR8G5Q8NG78 346 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 OR2G2Q8NGZ5 317 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 PPP1R14AQ96A00 147 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 LYZL4Q96KX0 146 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 CACNG6Q9BXT2 260 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 CHCHD3Q9NX63 227 aaKnown RBP13.69□□□□□ -0.22
BRK1-201ENST00000530758 NKIRAS2Q9NYR9 191 aa13.69□□□□□ -0.22
BRK1-201ENST00000530758 USF3Q68DE3 2245 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 A0A1B0GTI1 187 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 A0A1W2PPW3 197 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 CD300LBA8K4G0 201 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 C17orf100A8MU93 164 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 MRPS14O60783 128 aaKnown RBP13.68□□□□□ -0.22
BRK1-201ENST00000530758 RPP14O95059 124 aaKnown RBP13.68□□□□□ -0.22
BRK1-201ENST00000530758 MT-ND5P03915 603 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 ISG15P05161 165 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 ATP6V1B1P15313 513 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 CCL1P22362 96 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 NANOS3P60323 173 aaKnown RBP13.68□□□□□ -0.22
BRK1-201ENST00000530758 TNK1Q13470 666 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 OR2T2Q6IF00 324 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 ZNF786Q8N393 782 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 RPS4Y2Q8TD47 263 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 SPRYD4Q8WW59 207 aaPredicted RBP13.68□□□□□ -0.22
BRK1-201ENST00000530758 TRMT61AQ96FX7 289 aaKnown RBP13.68□□□□□ -0.22
BRK1-201ENST00000530758 DIRC2Q96SL1 478 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 SLC30A2Q9BRI3 323 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 BABAM2Q9NXR7 383 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 FRRS1LQ9P0K9 344 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 ITGB1BP2Q9UKP3 347 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 BLOC1S6Q9UL45 172 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 ZDHHC8Q9ULC8 765 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 N6AMT1Q9Y5N5 214 aa13.68□□□□□ -0.22
BRK1-201ENST00000530758 ARID1AO14497 2285 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 TRIM64A6NGJ6 449 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 TIMM8AO60220 97 aaPredicted RBP13.67□□□□□ -0.22
BRK1-201ENST00000530758 RPSAP08865 295 aaKnown RBP13.67□□□□□ -0.22
BRK1-201ENST00000530758 HTR1AP08908 422 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 CDKN1AP38936 164 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 PSMB10P40306 273 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 ALDH3B1P43353 468 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 GSK3AP49840 483 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 GBX2P52951 348 aaPredicted RBP13.67□□□□□ -0.22
BRK1-201ENST00000530758 GABARAPL2P60520 117 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 ALKBH1Q13686 389 aaKnown RBP13.67□□□□□ -0.22
BRK1-201ENST00000530758 NKPD1Q17RQ9 610 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 ZMAT1Q5H9K5 638 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 WDR38Q5JTN6 314 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 BCL2L15Q5TBC7 163 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 OR2G6Q5TZ20 316 aa13.67□□□□□ -0.22
BRK1-201ENST00000530758 Q6ZR03 302 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms