RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	OR2J3	O76001	311 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	GALR1	P47211	349 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	NOVA1	P51513	510 aa	Known RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	PPP1CB	P62140	327 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	MZT1	Q08AG7	82 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	ACOT6	Q3I5F7	207 aa	Predicted RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	PYCR3	Q53H96	274 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	SYS1	Q8N2H4	156 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	ZNF383	Q8NA42	475 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	DTWD2	Q8NBA8	298 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	GPR32P1	Q8NGA4	272 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	OR6S1	Q8NH40	331 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	BCL7C	Q8WUZ0	217 aa	Predicted RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	FAM3C	Q92520	227 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	ELOVL1	Q9BW60	279 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	RAB18	Q9NP72	206 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	DYNLRB1	Q9NP97	96 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	MED29	Q9NX70	200 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	KIR2DS1	A0A191URI9	304 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	DBX1	A6NMT0	343 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	POU3F3	P20264	500 aa	Predicted RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	KIR2DS4	P43632	304 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	KIR2DS1	Q14954	304 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	DND1	Q8IYX4	353 aa	Known RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	NUBPL	Q8TB37	319 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	HGD	Q93099	445 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	HS3ST2	Q9Y278	367 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	WSB1	Q9Y6I7	421 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986		K7EQM0	130 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	NDUFB6	O95139	128 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	IL5	P05113	134 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	CXCL3	P19876	107 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	COX5A	P20674	150 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	ENPP1	P22413	925 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	PGF	P49763	221 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	AGFG1	P52594	562 aa	Known RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	SLC37A1	P57057	533 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	RPL11	P62913	178 aa	Known RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	SLC17A1	Q14916	467 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	RNASEK	Q6P5S7	137 aa	Known RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	CYHR1	Q6ZMK1	362 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	OR10G3	Q8NGC4	313 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	GPX8	Q8TED1	209 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	THOC3	Q96J01	351 aa	Known RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	TUBGCP6	Q96RT7	1819 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986		A0A1W2PNR3	127 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	ZNF814	B7Z6K7	855 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	AP4M1	O00189	453 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	MBTPS2	O43462	519 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	ZNF217	O75362	1048 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	PIAS2	O75928	621 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	IGFBP6	P24592	240 aa	Predicted RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	EMD	P50402	254 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	ERVS71-1	P61550	626 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	TMEM267	Q0VDI3	215 aa	Predicted RBP	6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	WDR88	Q6ZMY6	472 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	S100A7A	Q86SG5	101 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	PLPP6	Q8IY26	295 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	FAM210B	Q96KR6	192 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	IL17B	Q9UHF5	180 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	FOXJ3	Q9UPW0	622 aa		6.91	□□□□□ -1.3
CTNND1-223	ENST00000529986	BCAT2	O15382	392 aa	Predicted RBP	6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	SCRG1	O75711	98 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	GNB1	P62873	340 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	PPP1R1A	Q13522	171 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	PDCD1	Q15116	288 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	VWA1	Q6PCB0	445 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	C5orf46	Q6UWT4	87 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	DRAM2	Q6UX65	266 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	OR52N4	Q8NGI2	321 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	LHX6	Q9UPM6	363 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	CACNA1C	Q13936	2221 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	FGF17	O60258	216 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	HOXC13	P31276	330 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	CHRNA7	P36544	502 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	DEFB103A	P81534	67 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986		Q1RN00	199 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	TMEM128	Q5BJH2	165 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	BCORP1	Q8N888	145 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	TMEM229B	Q8NBD8	167 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	FGF13	Q92913	245 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	STAC	Q99469	402 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	TMPRSS13	Q9BYE2	586 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	PBX4	Q9BYU1	374 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	PBOV1	Q9GZY1	135 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	GNB4	Q9HAV0	340 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	ARPC3	O15145	178 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	SPRY1	O43609	319 aa	Predicted RBP	6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	TSPAN12	O95859	305 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	IGF2	P01344	180 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	TCN2	P20062	427 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	KCNJ3	P48549	501 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	TIAL1	Q01085	375 aa	Known RBP eCLIP	6.9	□□□□□ -1.3	5e-7	■■■■■ 26.8
CTNND1-223	ENST00000529986	DHRS2	Q13268	280 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	RAB32	Q13637	225 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	ARIH2OS	Q8N7S6	290 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	GOT1L1	Q8NHS2	421 aa	Predicted RBP	6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	ERGIC1	Q969X5	290 aa		6.9	□□□□□ -1.3
CTNND1-223	ENST00000529986	TECTB	Q96PL2	329 aa		6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms