RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 GMDSO60547 372 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 NDUFB6O95139 128 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 SLC2A1P11166 492 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 ABOP16442 354 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 ALDH3B1P43353 468 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 MAGEA5P43359 124 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 ARG2P78540 354 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 QRFPP83859 136 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 CD83Q01151 205 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 RSPO1Q2MKA7 263 aaPredicted RBP12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 SFRP4Q6FHJ7 346 aaPredicted RBP12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 MTFR2Q6P444 385 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 SLC16A14Q7RTX9 510 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 OR5AS1Q8N127 324 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 SEH1LQ96EE3 360 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF845Q96IR2 970 aaPredicted RBP12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 PRRG4Q9BZD6 226 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 NOX3Q9HBY0 568 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 UPB1Q9UBR1 384 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 POU2F3Q9UKI9 436 aa12.96□□□□□ -0.34
ECHDC1-220ENST00000528402 FAM172BPA6NC97 362 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 FAM166BA8MTA8 275 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 ICMTO60725 284 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 SNAPC5O75971 98 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 KDM4BO94953 1096 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 ITGB2P05107 769 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 HCKP08631 526 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 VSIG8P0DPA2 414 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 CPN1P15169 458 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 NTF4P34130 210 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 MRPS15P82914 257 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 ARL6IP1Q15041 203 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 RBMS2Q15434 407 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF766Q5HY98 468 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 AWAT2Q6E213 333 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 DPPA2Q7Z7J5 298 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 SSC4DQ8WTU2 575 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 AQP3Q92482 292 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF775Q96BV0 537 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 URM1Q9BTM9 101 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 EXO5Q9H790 373 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 ASCL3Q9NQ33 180 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 MRPL15Q9P015 296 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 ING4Q9UNL4 249 aa12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 MRPS28Q9Y2Q9 187 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-220ENST00000528402 SPAARA0A1B0GVQ0 90 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 SNRPGP15A8MWD9 76 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 RAB27BO00194 218 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 COX5BP10606 129 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 GTF2F2P13984 249 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 MEF2DQ14814 521 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF260Q3ZCT1 412 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF782Q6ZMW2 699 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 BIVMQ86UB2 503 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 MCEMP1Q8IX19 187 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF101Q8IZC7 436 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 PAQR4Q8N4S7 273 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 ABHD3Q8WU67 409 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 GCDHQ92947 438 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF837Q96EG3 531 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 LYZL4Q96KX0 146 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 HYLS1Q96M11 299 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 SLC25A21Q9BQT8 299 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 HES7Q9BYE0 225 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 OR2H1Q9GZK4 316 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 CHST5Q9GZS9 411 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 CST11Q9H112 138 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 SLC6A15Q9H2J7 730 aa12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 TP63Q9H3D4 680 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 RANBP3Q9H6Z4 567 aaPredicted RBP12.94□□□□□ -0.34
ECHDC1-220ENST00000528402 CNTRLQ7Z7A1 2325 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF587BE7ETH6 402 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 TNFRSF10AO00220 468 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 CYB5AP00167 134 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 GSTP1P09211 210 aaKnown RBP12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 ANXA3P12429 323 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 CEACAM1P13688 526 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF32P17041 273 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 TBPP20226 339 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 PRKACBP22694 351 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 GZMKP49863 264 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 SRYQ05066 204 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 RIPPLY1Q0D2K3 151 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 ZMYND11Q15326 602 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 PNLIPRP3Q17RR3 467 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 STEAP1BQ6NZ63 245 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 GLIPR1L1Q6UWM5 242 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 ZNF100Q8IYN0 542 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 GABRG1Q8N1C3 465 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 SEMA6DQ8NFY4 1073 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 OR56B1Q8NGI3 324 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 OR10R2Q8NGX6 335 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 GIMAP1Q8WWP7 306 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 SPSB1Q96BD6 273 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 SGK3Q96BR1 496 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 TECTBQ96PL2 329 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 ALKBH3Q96Q83 286 aaPredicted RBP12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 GPER1Q99527 375 aa12.93□□□□□ -0.34
ECHDC1-220ENST00000528402 ALX4Q9H161 411 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms