RNA–Protein interactions for RNA: ENST00000528142.5

VPS28-209, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS28, Length 1,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-209ENST00000528142 ERCC1P07992 297 aaPredicted RBP18.09■□□□□ 0.49
VPS28-209ENST00000528142 ZNF24P17028 368 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 SDHBP21912 280 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 CAPZA1P52907 286 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 TPTEP56180 551 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 SNAI3Q3KNW1 292 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 SFRP5Q5T4F7 317 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 NUFIP2Q7Z417 695 aaKnown RBP18.09■□□□□ 0.49
VPS28-209ENST00000528142 MCEMP1Q8IX19 187 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 OR52H1Q8NGJ2 320 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 C7orf50Q9BRJ6 194 aaKnown RBP18.09■□□□□ 0.49
VPS28-209ENST00000528142 ZNF587BE7ETH6 402 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 DHRS3O75911 302 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 FOXG1P55316 489 aaPredicted RBP18.09■□□□□ 0.49
VPS28-209ENST00000528142 RSBN1Q5VWQ0 802 aaPredicted RBP18.09■□□□□ 0.49
VPS28-209ENST00000528142 CDH26Q8IXH8 852 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 CCDC54Q8NEL0 328 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 SGK3Q96BR1 496 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 ATG5Q9H1Y0 275 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 OR10A2Q9H208 303 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 ZNF224Q9NZL3 707 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 KLK11Q9UBX7 282 aa18.09■□□□□ 0.49
VPS28-209ENST00000528142 CENPXA8MT69 81 aa18.08■□□□□ 0.48
VPS28-209ENST00000528142 RNF144BQ7Z419 303 aa18.08■□□□□ 0.48
VPS28-209ENST00000528142 AKAP14Q86UN6 197 aa18.08■□□□□ 0.48
VPS28-209ENST00000528142 SSC4DQ8WTU2 575 aa18.08■□□□□ 0.48
VPS28-209ENST00000528142 ZNF175Q9Y473 711 aa18.08■□□□□ 0.48
VPS28-209ENST00000528142 ZNF407Q9C0G0 2248 aa18.08■□□□□ 0.48
VPS28-209ENST00000528142 IGKV1-9A0A0C4DH69 117 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 SLC22A20A6NK97 555 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 ALDOBP05062 364 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 RAB6AP20340 208 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 ZNF93P35789 620 aaPredicted RBP18.07■□□□□ 0.48
VPS28-209ENST00000528142 HTR5AP47898 357 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 QRFPP83859 136 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 CREB3L1Q96BA8 519 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 PRDM14Q9GZV8 571 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 GP6Q9HCN6 339 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 TRAV18A0A075B6X5 111 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 WISP2O76076 250 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 ECDO95905 644 aaPredicted RBP18.07■□□□□ 0.48
VPS28-209ENST00000528142 THBS4P35443 961 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 SNTB2Q13425 540 aaKnown RBP18.07■□□□□ 0.48
VPS28-209ENST00000528142 OR10K2Q6IF99 312 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 PAQR4Q8N4S7 273 aaPredicted RBP18.07■□□□□ 0.48
VPS28-209ENST00000528142 CEP295Q9C0D2 2601 aa18.07■□□□□ 0.48
VPS28-209ENST00000528142 BPNT1O95861 308 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
VPS28-209ENST00000528142 TATDN3Q17R31 274 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 PABPC1L2AQ5JQF8 200 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 C9orf135Q5VTT2 229 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 ZNF100Q8IYN0 542 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 PHF21AQ96BD5 680 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 C10orf35Q96D05 121 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 MYEF2Q9P2K5 600 aaKnown RBP18.06■□□□□ 0.48
VPS28-209ENST00000528142 UPB1Q9UBR1 384 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 FBLN5Q9UBX5 448 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 RAB22AQ9UL26 194 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 PIEZO1Q92508 2521 aa18.06■□□□□ 0.48
VPS28-209ENST00000528142 ANKRD20A5PA0PJZ0 165 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 MTRF1O75570 445 aaKnown RBP18.05■□□□□ 0.48
VPS28-209ENST00000528142 ALX3O95076 343 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 MT-ND4P03905 459 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 PRF1P14222 555 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 AGTR1P30556 359 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 IGFL3Q6UXB1 125 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 CPEB3Q8NE35 698 aaKnown RBP18.05■□□□□ 0.48
VPS28-209ENST00000528142 DPAGT1Q9H3H5 408 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 HRASLSQ9HDD0 168 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 MRPL15Q9P015 296 aaKnown RBP18.05■□□□□ 0.48
VPS28-209ENST00000528142 A0A0A6YYH2 397 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 A6NJ64 397 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 INMT-MINDY4F8WBC2 141 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 H7C417 338 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 KLK10O43240 276 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 VSIG8P0DPA2 414 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 GIFP27352 417 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 AP3S2P59780 193 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 FAPQ12884 760 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 UNC119Q13432 240 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 UTS2BQ765I0 119 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 ANGPTL5Q86XS5 388 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 PP6455Q8WZ26 134 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 SPACA5Q96QH8 159 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 CHST5Q9GZS9 411 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 MTFP1Q9UDX5 166 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 ATPIF1Q9UII2 106 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 MSRB2Q9Y3D2 182 aa18.05■□□□□ 0.48
VPS28-209ENST00000528142 A0A096LPE4 126 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 A0A1W2PPZ6 126 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 HMX3A6NHT5 357 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 DHRS7CA6NNS2 312 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 LCATP04180 440 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 GSTT2BP0CG30 244 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 TRAPPC2P0DI81 140 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 TRAPPC2BP0DI82 140 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 FCGR2AP12318 317 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 FAHP16930 419 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 HLA-DMAP28067 261 aa18.04■□□□□ 0.48
VPS28-209ENST00000528142 BTG1P62324 171 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms