RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 BATF2Q8N1L9 274 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 ZNF610Q8N9Z0 462 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 SLC38A9Q8NBW4 561 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 OR52I2Q8NH67 350 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 FOXJ2Q9P0K8 574 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 A0A0B4J203 849 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 A0A0J9YW62 118 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 KIR2DS1A0A191URI9 304 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 ETV6P41212 452 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 KIR2DS4P43632 304 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 FUT6P51993 359 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 AGFG1P52594 562 aaKnown RBP13.41□□□□□ -0.26
USP47-207ENST00000527733 KIR2DS1Q14954 304 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 OR10K2Q6IF99 312 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 HAGHLQ6PII5 290 aaPredicted RBP13.41□□□□□ -0.26
USP47-207ENST00000527733 ITPKCQ96DU7 683 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 TECTBQ96PL2 329 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 NLRC5Q86WI3 1866 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 ZNF169Q14929 603 aaPredicted RBP13.41□□□□□ -0.26
USP47-207ENST00000527733 LTC4SQ16873 150 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 TMEM211Q6ICI0 200 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 PRSS35Q8N3Z0 413 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 ABHD3Q8WU67 409 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 GIMAP1Q8WWP7 306 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 SPSB1Q96BD6 273 aa13.41□□□□□ -0.26
USP47-207ENST00000527733 SDK2Q58EX2 2172 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 IGHV3-64DA0A0J9YX35 117 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 TMEM235A6NFC5 223 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
USP47-207ENST00000527733 IGHA1P01876 353 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 ASAH2BP0C7U1 165 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 CEACAM1P13688 526 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 HAAOP46952 286 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 TAF9Q16594 264 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 SLC25A35Q3KQZ1 300 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 RNLSQ5VYX0 342 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 OR1S1Q8NH92 325 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 SECTM1Q8WVN6 248 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 LYZL6O75951 148 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 ATF1P18846 271 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 EPHA1P21709 976 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 ZNF85Q03923 595 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 INPP5JQ15735 1006 aaPredicted RBP13.4□□□□□ -0.26
USP47-207ENST00000527733 SPATA46Q5T0L3 261 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 AKIRIN1Q9H9L7 192 aaPredicted RBP13.4□□□□□ -0.26
USP47-207ENST00000527733 MRM2Q9UI43 246 aaKnown RBP13.4□□□□□ -0.26
USP47-207ENST00000527733 TCF20Q9UGU0 1960 aaKnown RBP13.4□□□□□ -0.26
USP47-207ENST00000527733 LIMS1P48059 325 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 CDC20Q12834 499 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 CATR1Q13166 79 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 GDPD3Q7L5L3 318 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 C17orf82Q86X59 251 aaPredicted RBP13.4□□□□□ -0.26
USP47-207ENST00000527733 TMEM251Q8N6I4 163 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 APCDD1LQ8NCL9 501 aa13.4□□□□□ -0.26
USP47-207ENST00000527733 LSM5Q9Y4Y9 91 aaKnown RBP13.4□□□□□ -0.26
USP47-207ENST00000527733 PATE4P0C8F1 98 aa13.4□□□□□ -0.27
USP47-207ENST00000527733 SLC9A3R2Q15599 337 aa13.4□□□□□ -0.27
USP47-207ENST00000527733 A0A1B0GTH9 108 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 CD300LBA8K4G0 201 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 HLA-DOBP13765 273 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 ZP4Q12836 540 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 EDDM3AQ14507 147 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 SLC30A7Q8NEW0 376 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 NKX3-1Q99801 234 aaPredicted RBP13.39□□□□□ -0.27
USP47-207ENST00000527733 PI4KAP42356 2102 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 RNF212BA8MTL3 300 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 HS3ST1O14792 307 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 SPINT2O43291 252 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 GDF9O60383 454 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 DHRS3O75911 302 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 HOXB5P09067 269 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 ZNF728P0DKX0 622 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 CAV2P51636 162 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 DGCR2P98153 550 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 LCN10Q6JVE6 187 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 KANSL1Q7Z3B3 1105 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 ZBTB44Q8NCP5 570 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 TMEM100Q9NV29 134 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 COPS3Q9UNS2 423 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 A0A0A6YYH2 397 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 LOC101059948A0A1B0GTJ6 334 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 A6NJ64 397 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 RECKO95980 971 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 PMP2P02689 132 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 EIF4EP06730 217 aaKnown RBP13.39□□□□□ -0.27
USP47-207ENST00000527733 CREB3L2Q70SY1 520 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 CDC20BQ86Y33 519 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 NECAP2Q9NVZ3 263 aa13.39□□□□□ -0.27
USP47-207ENST00000527733 A0A1W2PR80 420 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 ZNF732B4DXR9 585 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 TGFBR3LH3BV60 316 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 SH2D1BO14796 132 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 ARPC5O15511 151 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 CLDN20P56880 219 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 CAMK2BQ13554 666 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 DMRTC1Q5HYR2 192 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 TFAP2EQ6VUC0 442 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 KIRREL1Q96J84 757 aa13.38□□□□□ -0.27
USP47-207ENST00000527733 QPCTLQ9NXS2 382 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms