RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ACSM4P0C7M7 580 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 IGHV1-2P23083 117 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 NR4A2P43354 598 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 PRKXP51817 358 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 PITPNAQ00169 270 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 STK11Q15831 433 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 IGFBP7Q16270 282 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 GABRG1Q8N1C3 465 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 CELF2-AS1Q8N7Q2 184 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 RND1Q92730 232 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 FBXO17Q96EF6 278 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 ZNF629Q9UEG4 869 aaPredicted RBP16.38■□□□□ 0.21
SMPD1-203ENST00000527275 HIVEP3Q5T1R4 2406 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 CCL21O00585 134 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 OPRM1P35372 400 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 PSMA6P60900 246 aaKnown RBP16.38■□□□□ 0.21
SMPD1-203ENST00000527275 BAIAP2L2Q6UXY1 529 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 ZNF627Q7L945 461 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 LUZP2Q86TE4 346 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 SKA3Q8IX90 412 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 GJC3Q8NFK1 279 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 RFT1Q96AA3 541 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 DDX28Q9NUL7 540 aaKnown RBP16.38■□□□□ 0.21
SMPD1-203ENST00000527275 TAS2R4Q9NYW5 299 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 STEAP1Q9UHE8 339 aa16.38■□□□□ 0.21
SMPD1-203ENST00000527275 IGFBP3P17936 291 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-203ENST00000527275 FSTP19883 344 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 NRN1LQ496H8 165 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 ZNF57Q68EA5 555 aaPredicted RBP16.37■□□□□ 0.21
SMPD1-203ENST00000527275 TMEM211Q6ICI0 200 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 SLC25A38Q96DW6 304 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 MOB1AQ9H8S9 216 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 NUFIP1Q9UHK0 495 aaKnown RBP16.37■□□□□ 0.21
SMPD1-203ENST00000527275 ETV7Q9Y603 341 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 LANCL1O43813 399 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 LYZL6O75951 148 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 PATE4P0C8F1 98 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 GRB2P62993 217 aaKnown RBP16.37■□□□□ 0.21
SMPD1-203ENST00000527275 LIX1LQ8IVB5 337 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 ABCG5Q9H222 651 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 N6AMT1Q9Y5N5 214 aa16.37■□□□□ 0.21
SMPD1-203ENST00000527275 EEF1E1O43324 174 aaKnown RBP16.36■□□□□ 0.21
SMPD1-203ENST00000527275 LMX1BO60663 402 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 FARS2O95363 451 aaKnown RBP16.36■□□□□ 0.21
SMPD1-203ENST00000527275 MMP15P51511 669 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 MZT2BQ6NZ67 158 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 ZNF474Q6S9Z5 364 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-203ENST00000527275 BEND4Q6ZU67 534 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 FJX1Q86VR8 437 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 SYNPRQ8TBG9 265 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 S100A16Q96FQ6 103 aaKnown RBP16.36■□□□□ 0.21
SMPD1-203ENST00000527275 ZNF275Q9NSD4 429 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-203ENST00000527275 ADGRG4Q8IZF6 3080 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 B8ZZF3 427 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 EEF1E1-BLOC1S5C9J1V9 151 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 SYT7O43581 403 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 RAD51DO75771 328 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 COX5AP20674 150 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 CFPP27918 469 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 MAP2K3P46734 347 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 UQCRFS1P47985 274 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 CX3CR1P49238 355 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 ART1P52961 327 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 ZNF121P58317 390 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-203ENST00000527275 TGFBR3Q03167 851 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 TSC22D1Q15714 1073 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 HIKESHIQ53FT3 197 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 GLT8D1Q68CQ7 371 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 SLC16A14Q7RTX9 510 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 SERPINA12Q8IW75 414 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 IZUMO1Q8IYV9 350 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 OR1K1Q8NGR3 316 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 FGFBP3Q8TAT2 258 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 PRR7Q8TB68 274 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 RAB40AQ8WXH6 277 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 TRIM63Q969Q1 353 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 ZNF224Q9NZL3 707 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 RABL2AQ9UBK7 228 aaPredicted RBP16.36■□□□□ 0.21
SMPD1-203ENST00000527275 RABL2BQ9UNT1 228 aa16.36■□□□□ 0.21
SMPD1-203ENST00000527275 A8MXE2 369 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 LYRM1O43325 122 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 CST2P09228 141 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 SLC2A1P11166 492 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 SCAND1P57086 179 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 GALK2Q01415 458 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 ANKRD16Q6P6B7 361 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 ZNF283Q8N7M2 679 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 PLPP7Q8NBV4 271 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 ENKURQ8TC29 256 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 FGGYQ96C11 551 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 MMP28Q9H239 520 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 RBFOX1Q9NWB1 397 aaKnown RBP16.35■□□□□ 0.21
SMPD1-203ENST00000527275 SLC5A6Q9Y289 635 aa16.35■□□□□ 0.21
SMPD1-203ENST00000527275 MEGF11A6BM72 1044 aa16.34■□□□□ 0.21
SMPD1-203ENST00000527275 SLC17A2O00624 439 aa16.34■□□□□ 0.21
SMPD1-203ENST00000527275 MSTNO14793 375 aa16.34■□□□□ 0.21
SMPD1-203ENST00000527275 KIR2DL3P43628 341 aa16.34■□□□□ 0.21
SMPD1-203ENST00000527275 HIST1H3AP68431 136 aa16.34■□□□□ 0.21
SMPD1-203ENST00000527275 RAB11BQ15907 218 aa16.34■□□□□ 0.21
SMPD1-203ENST00000527275 HIST2H3PS2Q5TEC6 136 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms