RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SELENOHQ8IZQ5 122 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 CBR4Q8N4T8 237 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 RNF10Q8N5U6 811 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 TRAM1L1Q8N609 369 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 HSD17B11Q8NBQ5 300 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 INO80EQ8NBZ0 244 aaPredicted RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 CHST4Q8NCG5 386 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 FBXO36Q8NEA4 188 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 NOXO1Q8NFA2 376 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 OR1S2Q8NGQ3 325 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 OR10G6Q8NH81 332 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 OR5K2Q8NHB8 316 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 CLHC1Q8NHS4 586 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 TCP10LQ8TDR4 215 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 ZFP90Q8TF47 636 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 LRRC29Q8WV35 223 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 DNAJB3Q8WWF6 145 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 RASSF5Q8WWW0 418 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 TCEAL3Q969E4 200 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 FAM131CQ96AQ9 280 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 ISG20Q96AZ6 181 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 LRRC45Q96CN5 670 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 DGCR14Q96DF8 476 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 CHMP6Q96FZ7 201 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 PDXPQ96GD0 296 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 MSANTD3Q96H12 275 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 CYTH2Q99418 400 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 PHB2Q99623 299 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC29A1Q99808 456 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 LLPHQ9BRT6 129 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 CALN1Q9BXU9 219 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 FRMD8P1Q9BZ68 369 aaPredicted RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 TM6SF2Q9BZW4 377 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 FAM107BQ9H098 131 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 C1orf198Q9H425 327 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 GOLPH3Q9H4A6 298 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 RPP21Q9H633 154 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 SPACA1Q9HBV2 294 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 NOX3Q9HBY0 568 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 MRPS30Q9NP92 439 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 FGF20Q9NP95 211 aaPredicted RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 SLCO1B3Q9NPD5 702 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 AGPAT4Q9NRZ5 378 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNRD1Q9P1U0 126 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 MYEF2Q9P2K5 600 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 ATPIF1Q9UII2 106 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 SAMHD1Q9Y3Z3 626 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 GMEB1Q9Y692 573 aa0.87□□□□□ -2.27
ECHDC1-219ENST00000526299 NSD2O96028 1365 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 A0A0A6YYH2 397 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TRAV19A0A0A6YYK7 116 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 IGHV5-10-1A0A0J9YXX1 117 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 A0A1W2PPV4 95 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TMEM223A0PJW6 202 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 MGAT4DA6NG13 374 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 A6NJ64 397 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF726A6NNF4 738 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SYCE1LA8MT33 242 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GOLGA8RI6L899 631 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF701M0R085 212 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 DFFAO00273 331 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 DNALI1O14645 258 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TOR1AO14656 332 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RAD51BO15315 384 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 NUPL2O15504 423 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RNF113AO15541 343 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RRP8O43159 456 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 CHST10O43529 356 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 CALUO43852 315 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 NIPSNAP2O75323 286 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC22A5O76082 557 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SRP72O76094 671 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 OR2F2O95006 317 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SEMA3DO95025 777 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 UTS2O95399 124 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PSMG1O95456 288 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 LSM8O95777 96 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PTTG1O95997 202 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 HPRT1P00492 218 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SERPINA5P05154 406 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GLAP06280 429 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SERPINE2P07093 398 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 KRT7P08729 469 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 P0C880 135 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 C1GALT1C1LP0DN25 315 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 OR5H8P0DN80 308 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 FOLR1P15328 257 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PRKACAP17612 351 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GGT1P19440 569 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RAB3AP20336 220 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GSTM3P21266 225 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 U2AF2P26368 475 aaKnown RBP eCLIP0.86□□□□□ -2.278e-7■■■■□ 21
ECHDC1-219ENST00000526299 GABRR2P28476 465 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 IL12BP29460 328 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TALDO1P37837 337 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 CEACAM3P40198 252 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 CEACAM6P40199 344 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 AQP2P41181 271 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GPR1P46091 355 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RPS5P46782 204 aaKnown RBP0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms