RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 GTF3AQ92664 365 aaKnown RBP11.03□□□□□ -0.64
SMPD1-202ENST00000526280 SGK3Q96BR1 496 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 PGAM5Q96HS1 289 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 OR10A2Q9H208 303 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 TPK1Q9H3S4 243 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 OPA3Q9H6K4 179 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 FAM206AQ9NX38 181 aa11.03□□□□□ -0.64
SMPD1-202ENST00000526280 VPS13CQ709C8 3753 aa11.02□□□□□ -0.64
SMPD1-202ENST00000526280 ZSCAN5BA6NJL1 495 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 IQCF6A8MYZ5 107 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 SSX4O60224 188 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 LY6HO94772 140 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 PNPP00491 289 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 IGHA1P01876 353 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 ADH4P08319 380 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 TIGD6Q17RP2 521 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 ZNF829Q3KNS6 432 aaPredicted RBP11.02□□□□□ -0.65
SMPD1-202ENST00000526280 CDONQ4KMG0 1287 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 ZMAT1Q5H9K5 638 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 Q5PR19 223 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 SPNS3Q6ZMD2 512 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 Q6ZR03 302 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 PLEKHG7Q6ZR37 379 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 KCTD20Q7Z5Y7 419 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 YIPF7Q8N8F6 280 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 OR8G5Q8NG78 346 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 OR8B12Q8NGG6 310 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 ZFAND2BQ8WV99 257 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 REEP6Q96HR9 211 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 RGCCQ9H4X1 137 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 MSL2Q9HCI7 577 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 VCX3AQ9NNX9 186 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 FGF20Q9NP95 211 aaPredicted RBP11.02□□□□□ -0.65
SMPD1-202ENST00000526280 INPP5EQ9NRR6 644 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 NKIRAS2Q9NYR9 191 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 PTTG2Q9NZH5 202 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 ZDHHC8Q9ULC8 765 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 R4GMQ9 66 aa11.02□□□□□ -0.65
SMPD1-202ENST00000526280 CHD3Q12873 2000 aaKnown RBP11.01□□□□□ -0.65
SMPD1-202ENST00000526280 ITPR3Q14573 2671 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 CD300LBA8K4G0 201 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 SPRY3O43610 288 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 LILRA1O75019 489 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 FAM20BO75063 409 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 IGHV1-46P01743 117 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 JUNBP17275 347 aaPredicted RBP11.01□□□□□ -0.65
SMPD1-202ENST00000526280 CFL1P23528 166 aaKnown RBP11.01□□□□□ -0.65
SMPD1-202ENST00000526280 CRHBPP24387 322 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 MAGEB1P43366 347 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 PRSS12P56730 875 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 FAM3AP98173 230 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 MFGE8Q08431 387 aaPredicted RBP11.01□□□□□ -0.65
SMPD1-202ENST00000526280 GALEQ14376 348 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 PCGF3Q3KNV8 242 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 LIPNQ5VXI9 398 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 DNM1P46Q6ZS02 220 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 KCTD8Q6ZWB6 473 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 LHFPL3Q86UP9 236 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 EGFL6Q8IUX8 553 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 OR5AS1Q8N127 324 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 WFDC11Q8NEX6 87 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 SIGLEC11Q96RL6 698 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 DIRC2Q96SL1 478 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 SLC30A2Q9BRI3 323 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 ZNF649Q9BS31 505 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 JAM3Q9BX67 310 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 PBOV1Q9GZY1 135 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 G6PC2Q9NQR9 355 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 PLCXD1Q9NUJ7 323 aa11.01□□□□□ -0.65
SMPD1-202ENST00000526280 RSL24D1Q9UHA3 163 aaKnown RBP11.01□□□□□ -0.65
SMPD1-202ENST00000526280 NUFIP1Q9UHK0 495 aaKnown RBP11.01□□□□□ -0.65
SMPD1-202ENST00000526280 A0A0U1RQV5 110 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 hCG_38984A0A1B0GV85 526 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 A0A1B0GWJ7 208 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 IRGMA1A4Y4 181 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 GGT3PA6NGU5 568 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 LOC110117498-PIK3R3F6TDL0 507 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 RPP14O95059 124 aaKnown RBP11□□□□□ -0.65
SMPD1-202ENST00000526280 HPXP02790 462 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 TACSTD2P09758 323 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 EEF1B2P24534 225 aaKnown RBP11□□□□□ -0.65
SMPD1-202ENST00000526280 DCKP27707 260 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 DDOSTP39656 456 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 OR12D2P58182 307 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 GABARAPL2P60520 117 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 ACTA2P62736 377 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 ACTG2P63267 376 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 CCL8P80075 99 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 TP53I3Q53FA7 332 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 FAM209AQ5JX71 171 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 BHLHE23Q8NDY6 225 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 OR13G1Q8NGZ3 307 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 SPRYD4Q8WW59 207 aaPredicted RBP11□□□□□ -0.65
SMPD1-202ENST00000526280 RORBQ92753 470 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 GGHQ92820 318 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 PPP1R14AQ96A00 147 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
SMPD1-202ENST00000526280 MRPL48Q96GC5 212 aaKnown RBP11□□□□□ -0.65
SMPD1-202ENST00000526280 LYZL4Q96KX0 146 aa11□□□□□ -0.65
SMPD1-202ENST00000526280 MOB1AQ9H8S9 216 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms