RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 HCCSP53701 268 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 CDH15P55291 814 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 PSMA6P60900 246 aaKnown RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 CXCR4P61073 352 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 ACTC1P68032 377 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 ACTA1P68133 377 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 ADARB1P78563 741 aaKnown RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 RIN1Q13671 783 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 MAD2L1BPQ15013 274 aaPredicted RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 ZNF691Q5VV52 312 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 ZNF322Q6U7Q0 402 aaPredicted RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 LRRN1Q6UXK5 716 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 FBXW12Q6X9E4 464 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 MRPL21Q7Z2W9 205 aaKnown RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 RFLNBQ8N5W9 214 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 OR10H4Q8NGA5 316 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 OR2T27Q8NH04 317 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 RHOXF1Q8NHV9 184 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 TFAP2CQ92754 450 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 CMBLQ96DG6 245 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 RNFT2Q96EX2 444 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 OR8B4Q96RC9 309 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 POFUT1Q9H488 388 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 OPA3Q9H6K4 179 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 CYSLTR2Q9NS75 346 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 MYEF2Q9P2K5 600 aaKnown RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 PURGQ9UJV8 347 aaKnown RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 COPS3Q9UNS2 423 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 LRCH1Q9Y2L9 728 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 LRP12Q9Y561 859 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 PCDHGB1Q9Y5G3 927 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 HSPE1-MOB4S4R3N1 261 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 LYNX1G3V0Z9 82 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 TBX1O43435 398 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 APOL3O95236 402 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 CLIC3O95833 236 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 KRT8P05787 483 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 LYNX1P0DP58 116 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 SLC2A1P11166 492 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 KITLGP21583 273 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 PCMT1P22061 227 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 RIDAP52758 137 aaKnown RBP8.62□□□□□ -1.03
VPS28-204ENST00000526054 ZNF121P58317 390 aaPredicted RBP8.62□□□□□ -1.03
VPS28-204ENST00000526054 ROM1Q03395 351 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 ZNF91Q05481 1191 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 EGR3Q06889 387 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 PSG7Q13046 419 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 MED21Q13503 144 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 TIGD6Q17RP2 521 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 ZNF829Q3KNS6 432 aaPredicted RBP8.62□□□□□ -1.03
VPS28-204ENST00000526054 ALKBH6Q3KRA9 238 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 FAM57BQ71RH2 274 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 NAA40Q86UY6 237 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 ZNF679Q8IYX0 411 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 C8orf59Q8N0T1 100 aaPredicted RBP8.62□□□□□ -1.03
VPS28-204ENST00000526054 OR52H1Q8NGJ2 320 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 HAVCR1Q96D42 359 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 PGAM5Q96HS1 289 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 MYCBPQ99417 103 aaPredicted RBP8.62□□□□□ -1.03
VPS28-204ENST00000526054 TBX5Q99593 518 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 ANKRD60Q9BZ19 345 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 TTTY10Q9BZA0 68 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 OR10A2Q9H208 303 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 AASSQ9UDR5 926 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 RPL36Q9Y3U8 105 aaKnown RBP8.62□□□□□ -1.03
VPS28-204ENST00000526054 N6AMT1Q9Y5N5 214 aa8.62□□□□□ -1.03
VPS28-204ENST00000526054 IRGMA1A4Y4 181 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 C17orf100A8MU93 164 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 PSMD9O00233 223 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 DENRO43583 198 aaKnown RBP8.61□□□□□ -1.03
VPS28-204ENST00000526054 FADS2O95864 444 aaKnown RBP8.61□□□□□ -1.03
VPS28-204ENST00000526054 DBTP11182 482 aaKnown RBP8.61□□□□□ -1.03
VPS28-204ENST00000526054 NAT2P11245 290 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 CFL1P23528 166 aaKnown RBP8.61□□□□□ -1.03
VPS28-204ENST00000526054 DCTDP32321 178 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 ZNF81P51508 661 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 DVL1P1P54792 670 aaPredicted RBP8.61□□□□□ -1.03
VPS28-204ENST00000526054 RAB40BQ12829 278 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 GK2Q14410 553 aaPredicted RBP8.61□□□□□ -1.03
VPS28-204ENST00000526054 HLXQ14774 488 aaPredicted RBP8.61□□□□□ -1.03
VPS28-204ENST00000526054 PCGF3Q3KNV8 242 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 SNAI3Q3KNW1 292 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 GLYATL3Q5SZD4 288 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 PGAP1Q75T13 922 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 FAM220AQ7Z4H9 259 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 GLCCI1Q86VQ1 547 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 APH1BQ8WW43 257 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 MRPL48Q96GC5 212 aaKnown RBP8.61□□□□□ -1.03
VPS28-204ENST00000526054 C1orf159Q96HA4 380 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 CNBD2Q96M20 576 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 DIRC2Q96SL1 478 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 RGCCQ9H4X1 137 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 NARFLQ9H6Q4 476 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 MOB1AQ9H8S9 216 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 BRD7Q9NPI1 651 aa8.61□□□□□ -1.03
VPS28-204ENST00000526054 TMEM269A0A1B0GVZ9 245 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 A0A1W2PQL4 384 aaPredicted RBP8.6□□□□□ -1.03
VPS28-204ENST00000526054 DAPL1A0PJW8 107 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 GGT3PA6NGU5 568 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 ZSCAN5BA6NJL1 495 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms