RNA–Protein interactions for RNA: ENST00000525396.5

CHEK1-207, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-207ENST00000525396 NIPAL2Q9H841 368 aa13.21□□□□□ -0.29
CHEK1-207ENST00000525396 TMEM100Q9NV29 134 aa13.21□□□□□ -0.29
CHEK1-207ENST00000525396 CLN6Q9NWW5 311 aa13.21□□□□□ -0.29
CHEK1-207ENST00000525396 FAM206AQ9NX38 181 aa13.21□□□□□ -0.29
CHEK1-207ENST00000525396 AASSQ9UDR5 926 aa13.21□□□□□ -0.29
CHEK1-207ENST00000525396 WIPI2Q9Y4P8 454 aa13.21□□□□□ -0.29
CHEK1-207ENST00000525396 TMEM14AQ9Y6G1 99 aa13.21□□□□□ -0.29
CHEK1-207ENST00000525396 TLN2Q9Y4G6 2542 aa13.21□□□□□ -0.29
CHEK1-207ENST00000525396 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.3
CHEK1-207ENST00000525396 IGHV3-64DA0A0J9YX35 117 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 MAGEB4O15481 346 aaPredicted RBP13.2□□□□□ -0.3
CHEK1-207ENST00000525396 ENTPD6O75354 484 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 GABRB1P18505 474 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 TNFRSF1AP19438 455 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 CA6P23280 308 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 MMP16P51512 607 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 SNRPGP62308 76 aaKnown RBP13.2□□□□□ -0.3
CHEK1-207ENST00000525396 MFGE8Q08431 387 aaPredicted RBP13.2□□□□□ -0.3
CHEK1-207ENST00000525396 POU4F2Q12837 409 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 LPCAT4Q643R3 524 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 DEGS2Q6QHC5 323 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF322Q6U7Q0 402 aaPredicted RBP13.2□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF679Q8IYX0 411 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 LYZL4Q96KX0 146 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 SIGLEC11Q96RL6 698 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 MNTQ99583 582 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 TBX5Q99593 518 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 SP140LQ9H930 580 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 YAE1D1Q9NRH1 226 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 TMEM106BQ9NUM4 274 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 IKZF2Q9UKS7 526 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 GMPPBQ9Y5P6 360 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 CSPG4Q6UVK1 2322 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 ABCA1O95477 2261 aa13.2□□□□□ -0.3
CHEK1-207ENST00000525396 ERICH4A6NGS2 130 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF670-ZNF695F2Z2N8 137 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 PHYHO14832 338 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 SRSF10O75494 262 aaKnown RBP13.19□□□□□ -0.3
CHEK1-207ENST00000525396 HOXB4P17483 251 aaPredicted RBP13.19□□□□□ -0.3
CHEK1-207ENST00000525396 GZMKP49863 264 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 RIPPLY3P57055 190 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 MAB21L1Q13394 359 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 LRRC36Q1X8D7 754 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 SLC25A30Q5SVS4 291 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 CYB5R2Q6BCY4 276 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 PLEKHG7Q6ZR37 379 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 ENTHD1Q8IYW4 607 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF420Q8TAQ5 688 aaPredicted RBP13.19□□□□□ -0.3
CHEK1-207ENST00000525396 TRUB1Q8WWH5 349 aaKnown RBP13.19□□□□□ -0.3
CHEK1-207ENST00000525396 HPS1Q92902 700 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 RFKQ969G6 155 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 C1orf159Q96HA4 380 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 APOL4Q9BPW4 351 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 MROQ9BYG7 248 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 GCM1Q9NP62 436 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 FAM118AQ9NWS6 357 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
CHEK1-207ENST00000525396 MRPL15Q9P015 296 aaKnown RBP13.19□□□□□ -0.3
CHEK1-207ENST00000525396 MRM2Q9UI43 246 aaKnown RBP13.19□□□□□ -0.3
CHEK1-207ENST00000525396 PPP1R3CQ9UQK1 317 aa13.19□□□□□ -0.3
CHEK1-207ENST00000525396 ANK3Q12955 4377 aaKnown RBP13.19□□□□□ -0.3
CHEK1-207ENST00000525396 TMEM269A0A1B0GVZ9 245 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 A0A1W2PQL4 384 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF254O75437 659 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 PNPP00491 289 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 IGHV2-70P01814 119 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 ACKR3P25106 362 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 DCTDP32321 178 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 CD200P41217 278 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 SRP9P49458 86 aaKnown RBP13.18□□□□□ -0.3
CHEK1-207ENST00000525396 GSK3AP49840 483 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
CHEK1-207ENST00000525396 LMO4P61968 165 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 TMED1Q13445 227 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 OR8G1Q15617 311 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 OR8B8Q15620 311 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 OCLNQ16625 522 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 PRAMEF6Q5VXH4 476 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 MOGAT3Q86VF5 341 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 GALNT4Q8N4A0 578 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 TIMD4Q96H15 378 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 RGCCQ9H4X1 137 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 PPP1R3EQ9H7J1 279 aa13.18□□□□□ -0.3
CHEK1-207ENST00000525396 MALRD1Q5VYJ5 2156 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 LOC100130705A0A1B0GUX0 176 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 FAM157AC9JC47 383 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 SLC16A6O15403 523 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 CFL1P23528 166 aaKnown RBP13.17□□□□□ -0.3
CHEK1-207ENST00000525396 PMELP40967 661 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 GATA4P43694 442 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 MTNR1AP48039 350 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 CDH15P55291 814 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 ELF3P78545 371 aaPredicted RBP13.17□□□□□ -0.3
CHEK1-207ENST00000525396 EGR3Q06889 387 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 SLC3A1Q07837 685 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF829Q3KNS6 432 aaPredicted RBP13.17□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF684Q5T5D7 378 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 ZNF771Q7L3S4 317 aaPredicted RBP13.17□□□□□ -0.3
CHEK1-207ENST00000525396 CELF2-AS1Q8N7Q2 184 aa13.17□□□□□ -0.3
CHEK1-207ENST00000525396 OR10H4Q8NGA5 316 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms