RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 GGT3PA6NGU5 568 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 RNASEK-C17orf49H0YIS7 233 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 M0R135 149 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 EDF1O60869 148 aaKnown RBP11.35□□□□□ -0.59
CSTF3-206ENST00000524827 LHBP01229 141 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 GRPP07492 148 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 GABRA5P31644 462 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 OMPP47874 163 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 TPTEP56180 551 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 ELF3P78545 371 aaPredicted RBP11.35□□□□□ -0.59
CSTF3-206ENST00000524827 KLF10Q13118 480 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 SLC36A3Q495N2 470 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 SLC35E4Q6ICL7 350 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 FKBP9P1Q75LS8 142 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 REC114Q7Z4M0 266 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 TSEN54Q7Z6J9 526 aaKnown RBP11.35□□□□□ -0.59
CSTF3-206ENST00000524827 CYP4Z1Q86W10 505 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 OR2AJ1Q8NGZ0 328 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 NPRL2Q8WTW4 380 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 ZNF799Q96GE5 643 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 ERMAPQ96PL5 475 aaPredicted RBP11.35□□□□□ -0.59
CSTF3-206ENST00000524827 PPA2Q9H2U2 334 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 CMTM6Q9NX76 183 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 MRPL15Q9P015 296 aaKnown RBP11.35□□□□□ -0.59
CSTF3-206ENST00000524827 DNAJB11Q9UBS4 358 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 SIGLEC9Q9Y336 463 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 ENPP4Q9Y6X5 453 aa11.35□□□□□ -0.59
CSTF3-206ENST00000524827 LOC100653049A0A140TA62 436 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 A0A1W2PRQ8 180 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 ANKRD61A6NGH8 418 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 UNC119BA6NIH7 251 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 CXCR6O00574 342 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 NPFFO15130 113 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 GPR37O15354 613 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 KRT34O76011 436 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 H1F0P07305 194 aaKnown RBP11.34□□□□□ -0.59
CSTF3-206ENST00000524827 EEF1B2P24534 225 aaKnown RBP11.34□□□□□ -0.59
CSTF3-206ENST00000524827 DLX1P56177 255 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 GUCA2AQ02747 115 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 KLRD1Q13241 179 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 DGCR6Q14129 220 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 MAPRE2Q15555 327 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 PCK2Q16822 640 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 RFX4Q33E94 735 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 FGD3Q5JSP0 725 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 WDR38Q5JTN6 314 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 CBLL1Q75N03 491 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 CMTM4Q8IZR5 234 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 FAM216BQ8N7L0 139 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 C11orf44Q8N8P7 122 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 SPERTQ8NA61 448 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 OR5R1Q8NH85 324 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 MAP6Q96JE9 813 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 NMNAT3Q96T66 252 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 CCL13Q99616 98 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 RPRD1BQ9NQG5 326 aaKnown RBP11.34□□□□□ -0.59
CSTF3-206ENST00000524827 ADA2Q9NZK5 511 aa11.34□□□□□ -0.59
CSTF3-206ENST00000524827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.33□□□□□ -0.6
CSTF3-206ENST00000524827 PAHP00439 452 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 RENP00797 406 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 SERPINA1P01009 418 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 HLA-DQA2P01906 255 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 SAA4P35542 130 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 EFNB2P52799 333 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 SEC23BQ15437 767 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 GLYATL3Q5SZD4 288 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 SMARCD3Q6STE5 483 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 C1orf122Q6ZSJ8 110 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 ZBTB46Q86UZ6 589 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 LNX2Q8N448 690 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 PNKDQ8N490 385 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 Q8N7P7 452 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 OR56B2PQ8NGI1 322 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 OR4K13Q8NH42 304 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 FANK1Q8TC84 345 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 MRAPQ8TCY5 172 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 LRRC29Q8WV35 223 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 SPTSSAQ969W0 71 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 FN3KQ9H479 309 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 TOR3AQ9H497 397 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 MRGBPQ9NV56 204 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 C14orf119Q9NWQ9 140 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 MRPL22Q9NWU5 206 aaKnown RBP11.33□□□□□ -0.6
CSTF3-206ENST00000524827 FOXJ3Q9UPW0 622 aa11.33□□□□□ -0.6
CSTF3-206ENST00000524827 TRBV4-1A0A0J9YWV2 114 aa11.32□□□□□ -0.6
CSTF3-206ENST00000524827 MEIOCA2RUB1 952 aa11.32□□□□□ -0.6
CSTF3-206ENST00000524827 BHLHE40O14503 412 aa11.32□□□□□ -0.6
CSTF3-206ENST00000524827 TROVE2P10155 538 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSTF3-206ENST00000524827 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
CSTF3-206ENST00000524827 HIST1H1CP16403 213 aaKnown RBP11.32□□□□□ -0.6
CSTF3-206ENST00000524827 OTX1P32242 354 aaPredicted RBP11.32□□□□□ -0.6
CSTF3-206ENST00000524827 LIPEQ05469 1076 aa11.32□□□□□ -0.6
CSTF3-206ENST00000524827 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
CSTF3-206ENST00000524827 MICBQ29980 383 aa11.32□□□□□ -0.6
CSTF3-206ENST00000524827 WDR86Q86TI4 376 aa11.32□□□□□ -0.6
CSTF3-206ENST00000524827 PPP1R35Q8TAP8 253 aa11.32□□□□□ -0.6
CSTF3-206ENST00000524827 CFHR4Q92496 578 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms