RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZNF799Q96GE5 643 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 SIRT7Q9NRC8 400 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 MRGBPQ9NV56 204 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 ADA2Q9NZK5 511 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 CYB5R1Q9UHQ9 305 aa21.36■■□□□ 1.01
PVT1-219ENST00000523427 RPUSD1Q9UJJ7 312 aaKnown RBP21.36■■□□□ 1.01
PVT1-219ENST00000523427 A0A1B0GW55 424 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 A0A1W2PRQ8 180 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 BTBD17A6NE02 478 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 PRB2P02812 416 aaPredicted RBP21.35■■□□□ 1.01
PVT1-219ENST00000523427 DUX4L2P0CJ85 424 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 DUX4L3P0CJ86 424 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 DUX4L4P0CJ87 422 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 DUX4L5P0CJ88 424 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 DUX4L6P0CJ89 424 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 DUX4L7P0CJ90 424 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 HIST1H1CP16403 213 aaKnown RBP21.35■■□□□ 1.01
PVT1-219ENST00000523427 SLC7A2P52569 658 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 DLX1P56177 255 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 DGCR6Q14129 220 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 CDONQ4KMG0 1287 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 HIST2H2BDQ6DRA6 164 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 DUX4L9Q6RFH8 374 aaPredicted RBP21.35■■□□□ 1.01
PVT1-219ENST00000523427 GCSAMQ8N6F7 178 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 SPTSSAQ969W0 71 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 MAP6Q96JE9 813 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 CCL13Q99616 98 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 IFT27Q9BW83 186 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 KRCC1Q9NPI7 259 aaPredicted RBP21.35■■□□□ 1.01
PVT1-219ENST00000523427 DUX4Q9UBX2 424 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 AP3M1Q9Y2T2 418 aa21.35■■□□□ 1.01
PVT1-219ENST00000523427 G3V4G9 280 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 NME4O00746 187 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 ECDO95905 644 aaPredicted RBP21.34■■□□□ 1.01
PVT1-219ENST00000523427 NOS3P29474 1203 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 GSK3BP49841 420 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 RFX4Q33E94 735 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 GLYATL3Q5SZD4 288 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 ARPINQ7Z6K5 226 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 SDR9C7Q8NEX9 313 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 C16orf95Q9H693 158 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 NDUFAF4Q9P032 175 aa21.34■■□□□ 1.01
PVT1-219ENST00000523427 PTBP3O95758 552 aaKnown RBP21.33■■□□□ 1.01
PVT1-219ENST00000523427 FBP1P09467 338 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 ZNF823P16415 610 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 SLC6A6P31641 620 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 PLPP7Q8NBV4 271 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 OR56B2PQ8NGI1 322 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 OR52D1Q9H346 318 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 FGFR1OP2Q9NVK5 253 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 MRPL22Q9NWU5 206 aaKnown RBP21.33■■□□□ 1.01
PVT1-219ENST00000523427 VPREB3Q9UKI3 123 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 KPTNQ9Y664 436 aa21.33■■□□□ 1.01
PVT1-219ENST00000523427 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP21.32■■□□□ 1
PVT1-219ENST00000523427 A0A1B0GVI7 797 aa21.32■■□□□ 1
PVT1-219ENST00000523427 OR6C68A6NDL8 312 aa21.32■■□□□ 1
PVT1-219ENST00000523427 ANKRD61A6NGH8 418 aa21.32■■□□□ 1
PVT1-219ENST00000523427 SLC2A1P11166 492 aa21.32■■□□□ 1
PVT1-219ENST00000523427 PYCR1P32322 319 aa21.32■■□□□ 1
PVT1-219ENST00000523427 SLC35F1Q5T1Q4 408 aa21.32■■□□□ 1
PVT1-219ENST00000523427 MRPL15Q9P015 296 aaKnown RBP21.32■■□□□ 1
PVT1-219ENST00000523427 CAB39Q9Y376 341 aaPredicted RBP21.32■■□□□ 1
PVT1-219ENST00000523427 TVP23AA6NH52 213 aa21.31■■□□□ 1
PVT1-219ENST00000523427 BHLHE40O14503 412 aa21.31■■□□□ 1
PVT1-219ENST00000523427 RHCEP18577 417 aa21.31■■□□□ 1
PVT1-219ENST00000523427 EEF1B2P24534 225 aaKnown RBP21.31■■□□□ 1
PVT1-219ENST00000523427 PRKXP51817 358 aa21.31■■□□□ 1
PVT1-219ENST00000523427 KLRD1Q13241 179 aa21.31■■□□□ 1
PVT1-219ENST00000523427 FBLN7Q53RD9 439 aa21.31■■□□□ 1
PVT1-219ENST00000523427 ZBTB46Q86UZ6 589 aa21.31■■□□□ 1
PVT1-219ENST00000523427 PNKDQ8N490 385 aa21.31■■□□□ 1
PVT1-219ENST00000523427 C11orf44Q8N8P7 122 aa21.31■■□□□ 1
PVT1-219ENST00000523427 SPERTQ8NA61 448 aa21.31■■□□□ 1
PVT1-219ENST00000523427 OR8S1Q8NH09 359 aa21.31■■□□□ 1
PVT1-219ENST00000523427 LRRC29Q8WV35 223 aa21.31■■□□□ 1
PVT1-219ENST00000523427 SEH1LQ96EE3 360 aa21.31■■□□□ 1
PVT1-219ENST00000523427 PPA2Q9H2U2 334 aa21.31■■□□□ 1
PVT1-219ENST00000523427 ZNRD1Q9P1U0 126 aa21.31■■□□□ 1
PVT1-219ENST00000523427 V9GYQ6 96 aa21.31■■□□□ 1
PVT1-219ENST00000523427 PAHP00439 452 aa21.3■■□□□ 1
PVT1-219ENST00000523427 GMFBP60983 142 aa21.3■■□□□ 1
PVT1-219ENST00000523427 IKZF1Q13422 519 aa21.3■■□□□ 1
PVT1-219ENST00000523427 KRT72Q14CN4 511 aa21.3■■□□□ 1
PVT1-219ENST00000523427 SLC35E4Q6ICL7 350 aa21.3■■□□□ 1
PVT1-219ENST00000523427 CGB2Q6NT52 195 aa21.3■■□□□ 1
PVT1-219ENST00000523427 FAM216BQ8N7L0 139 aa21.3■■□□□ 1
PVT1-219ENST00000523427 KCTD14Q9BQ13 255 aaPredicted RBP21.3■■□□□ 1
PVT1-219ENST00000523427 C14orf119Q9NWQ9 140 aa21.3■■□□□ 1
PVT1-219ENST00000523427 SIGLEC9Q9Y336 463 aa21.3■■□□□ 1
PVT1-219ENST00000523427 TSPAN9O75954 239 aa21.29■■□□□ 1
PVT1-219ENST00000523427 ALX3O95076 343 aa21.29■■□□□ 1
PVT1-219ENST00000523427 LHBP01229 141 aa21.29■■□□□ 1
PVT1-219ENST00000523427 TGFBR2P37173 567 aa21.29■■□□□ 1
PVT1-219ENST00000523427 TAF13Q15543 124 aa21.29■■□□□ 1
PVT1-219ENST00000523427 PCK2Q16822 640 aa21.29■■□□□ 1
PVT1-219ENST00000523427 MICBQ29980 383 aa21.29■■□□□ 1
PVT1-219ENST00000523427 WDR38Q5JTN6 314 aa21.29■■□□□ 1
PVT1-219ENST00000523427 CMTM4Q8IZR5 234 aa21.29■■□□□ 1
PVT1-219ENST00000523427 COPS4Q9BT78 406 aa21.29■■□□□ 1
PVT1-219ENST00000523427 CENPMQ9NSP4 180 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms