RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 LAIR2Q6ISS4 152 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 HAGHLQ6PII5 290 aaPredicted RBP11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 ALKAL2Q6UX46 152 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 OR2AE1Q8NHA4 323 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 PILRBQ9UKJ0 227 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 LIPT2A6NK58 231 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 LALBAP00709 142 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF32P17041 273 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 ETV6P41212 452 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 PRSS35Q8N3Z0 413 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 OR51A2Q8NGJ7 313 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 M1APQ8TC57 530 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 DDOQ99489 341 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 A0A1W2PR80 420 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 DEGS1O15121 323 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 FBXO24O75426 580 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 EPPINO95925 133 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 LINC00271P0C7V0 271 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 MGMTP16455 207 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 AGFG1P52594 562 aaKnown RBP11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 ACSM1Q08AH1 577 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF770Q6IQ21 691 aaPredicted RBP11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF774Q6NX45 483 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 OIT3Q8WWZ8 545 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 POFUT1Q9H488 388 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 KCNE5Q9UJ90 142 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 ANKRD36A6QL64 1941 aa11.68□□□□□ -0.54
PCDHGB1-201ENST00000523390 OR5H15A6NDH6 313 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 PHF1O43189 567 aaPredicted RBP11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 ICMTO60725 284 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 ISXQ2M1V0 245 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 PLXDC2Q6UX71 529 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 SMIM4Q8WVI0 70 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 RTL8AQ9BWD3 113 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 GON7Q9BXV9 100 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 RAB9BQ9NP90 201 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 LINC01387J3KSC0 135 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 PMS2P2O95744 297 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 HPP00738 406 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 HLA-HP01893 362 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 CRYAAP02489 173 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 SDHBP21912 280 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 OMGP23515 440 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 OPCMLQ14982 345 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 AKR1C8PQ5T2L2 129 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 NPAP1Q9NZP6 1156 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 B3GAT1Q9P2W7 334 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 FBXO4Q9UKT5 387 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 PMS2P1A4D2B8 440 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 AKR7A2O43488 359 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 MSL3P1P0C860 447 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 HLA-DOBP13765 273 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 PNLIPP16233 465 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 RAD52P43351 418 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 HAAOP46952 286 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 CAMK2BQ13554 666 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 MRGPREQ86SM8 312 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 HAO2Q9NYQ3 351 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 H3BMH7 237 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 SPRY1O43609 319 aaPredicted RBP11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 SSX5O60225 188 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 TSPAN15O95858 294 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 NFYAP23511 347 aaPredicted RBP11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 KIR2DL3P43628 341 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 OR8B8Q15620 311 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 INPP5JQ15735 1006 aaPredicted RBP11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 CD276Q5ZPR3 534 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZPLD1Q8TCW7 415 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 UCN2Q96RP3 112 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 RAB33BQ9H082 229 aa11.67□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF646O15015 1829 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF318Q5VUA4 2279 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 TRIM64A6NGJ6 449 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 TPT1P13693 172 aaKnown RBP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 C3AR1Q16581 482 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 ARSJQ5FYB0 599 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 DEFB108BQ8NET1 73 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF436Q9C0F3 470 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 C1orf123Q9NWV4 160 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 RFX2P48378 723 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 RAC3P60763 192 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 MFGE8Q08431 387 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 CLPPQ16740 277 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 DMKNQ6E0U4 476 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 JMJD6Q6NYC1 403 aaPredicted RBP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 ZNF610Q8N9Z0 462 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 SUMF1Q8NBK3 374 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 SLC38A9Q8NBW4 561 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 FAM234AQ9H0X4 552 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 WDR54Q9H977 334 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 ROS1P08922 2347 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 IGHA1P01876 353 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 GABRB1P18505 474 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 SLC22A25Q6T423 547 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 WFDC8Q8IUA0 241 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 TMEM185AQ8NFB2 350 aa11.66□□□□□ -0.54
PCDHGB1-201ENST00000523390 GPR87Q9BY21 358 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms