RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SERPINA1P01009 418 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 GRPP07492 148 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 DUX4L2P0CJ85 424 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 DUX4L3P0CJ86 424 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 DUX4L4P0CJ87 422 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 DUX4L5P0CJ88 424 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 DUX4L6P0CJ89 424 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 DUX4L7P0CJ90 424 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 SEC23BQ15437 767 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 SLC36A3Q495N2 470 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 SAMD5Q5TGI4 173 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 DUX4L9Q6RFH8 374 aaPredicted RBP18.67■□□□□ 0.58
PVT1-218ENST00000523328 SMARCD3Q6STE5 483 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 NPRL2Q8WTW4 380 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 RPRD1BQ9NQG5 326 aaKnown RBP18.67■□□□□ 0.58
PVT1-218ENST00000523328 DUX4Q9UBX2 424 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 AURKCQ9UQB9 309 aa18.67■□□□□ 0.58
PVT1-218ENST00000523328 CAB39Q9Y376 341 aaPredicted RBP18.67■□□□□ 0.58
PVT1-218ENST00000523328 TRBV4-1A0A0J9YWV2 114 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 BTBD17A6NE02 478 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 A6NLC8 198 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 PRB2P02812 416 aaPredicted RBP18.66■□□□□ 0.58
PVT1-218ENST00000523328 OPN1MWP04001 364 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 OPN1MW2P0DN77 364 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 OPN1MW3P0DN78 364 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 ELF3P78545 371 aaPredicted RBP18.66■□□□□ 0.58
PVT1-218ENST00000523328 LIPEQ05469 1076 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 RFX4Q33E94 735 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 FGD3Q5JSP0 725 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 SPERTQ8NA61 448 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 MRPL22Q9NWU5 206 aaKnown RBP18.66■□□□□ 0.58
PVT1-218ENST00000523328 AP3M1Q9Y2T2 418 aa18.66■□□□□ 0.58
PVT1-218ENST00000523328 NOTCH3Q9UM47 2321 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 hCG_1807616A0A1W2PRN6 198 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 GGT3PA6NGU5 568 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 ARPC3O15145 178 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 RENP00797 406 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 HIST1H1CP16403 213 aaKnown RBP18.65■□□□□ 0.58
PVT1-218ENST00000523328 OTX1P32242 354 aaPredicted RBP18.65■□□□□ 0.58
PVT1-218ENST00000523328 PRB3Q04118 309 aaPredicted RBP18.65■□□□□ 0.58
PVT1-218ENST00000523328 GLYATL3Q5SZD4 288 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 SLC35E4Q6ICL7 350 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 GALNT4Q8N4A0 578 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 OR4K13Q8NH42 304 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 RCN3Q96D15 328 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 DMRTB1Q96MA1 342 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 FN3KQ9H479 309 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 SIRT7Q9NRC8 400 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 ADA2Q9NZK5 511 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 NDUFAF4Q9P032 175 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 ONECUT1Q9UBC0 465 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 FBLN5Q9UBX5 448 aa18.65■□□□□ 0.58
PVT1-218ENST00000523328 RNASEK-C17orf49H0YIS7 233 aa18.64■□□□□ 0.57
PVT1-218ENST00000523328 DLX1P56177 255 aa18.64■□□□□ 0.57
PVT1-218ENST00000523328 PCK2Q16822 640 aa18.64■□□□□ 0.57
PVT1-218ENST00000523328 ARPINQ7Z6K5 226 aa18.64■□□□□ 0.57
PVT1-218ENST00000523328 C11orf53Q8IXP5 236 aa18.64■□□□□ 0.57
PVT1-218ENST00000523328 OR56B2PQ8NGI1 322 aa18.64■□□□□ 0.57
PVT1-218ENST00000523328 CCL13Q99616 98 aa18.64■□□□□ 0.57
PVT1-218ENST00000523328 FUZQ9BT04 418 aa18.64■□□□□ 0.57
PVT1-218ENST00000523328 OR6C68A6NDL8 312 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 HMGB1P1B2RPK0 211 aaPredicted RBP18.63■□□□□ 0.57
PVT1-218ENST00000523328 NME4O00746 187 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 BHLHE40O14503 412 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 GSTA4O15217 222 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 HLA-DQA2P01906 255 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 TROVE2P10155 538 aaKnown RBP eCLIP18.63■□□□□ 0.57
PVT1-218ENST00000523328 GUCA2AQ02747 115 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 HERPUD1Q15011 391 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 Q8N7P7 452 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 FANK1Q8TC84 345 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 SPTSSAQ969W0 71 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 OR52D1Q9H346 318 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 C14orf119Q9NWQ9 140 aa18.63■□□□□ 0.57
PVT1-218ENST00000523328 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.62■□□□□ 0.57
PVT1-218ENST00000523328 NPFFO15130 113 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 PIN1P1O15428 100 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 MUC1P15941 1255 aaPredicted RBP18.62■□□□□ 0.57
PVT1-218ENST00000523328 RHCEP18577 417 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 SLC6A6P31641 620 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 RPS27P42677 84 aaKnown RBP18.62■□□□□ 0.57
PVT1-218ENST00000523328 KLRD1Q13241 179 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 MICBQ29980 383 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 WDR38Q5JTN6 314 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 Q6ZTK2 550 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 WDR86Q86TI4 376 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 FAM216BQ8N7L0 139 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 OR5R1Q8NH85 324 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 TNFRSF14Q92956 283 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 DHRS1Q96LJ7 313 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 PPA2Q9H2U2 334 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 RNPEPL1Q9HAU8 725 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 KRCC1Q9NPI7 259 aaPredicted RBP18.62■□□□□ 0.57
PVT1-218ENST00000523328 KCNG2Q9UJ96 466 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 FAM32AQ9Y421 112 aaKnown RBP18.62■□□□□ 0.57
PVT1-218ENST00000523328 NBEAL2Q6ZNJ1 2754 aa18.62■□□□□ 0.57
PVT1-218ENST00000523328 KMT2CQ8NEZ4 4911 aaKnown RBP18.62■□□□□ 0.57
PVT1-218ENST00000523328 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.61■□□□□ 0.57
PVT1-218ENST00000523328 A0A1W2PRD5 423 aa18.61■□□□□ 0.57
PVT1-218ENST00000523328 A0A1W2PRF3 423 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms