RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 COQ7Q99807 217 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 HAO1Q9UJM8 370 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 PITPNC1Q9UKF7 332 aa11.1□□□□□ -0.63
NKX3-1-202ENST00000523261 CD300LBA8K4G0 201 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 H0YAE9 185 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 CTLA4P16410 223 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 RBM34P42696 430 aaKnown RBP11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 HIST1H3AP68431 136 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 ATPAF1Q5TC12 328 aaPredicted RBP11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 HIST2H3PS2Q5TEC6 136 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 STUMQ69YW2 141 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 SLC2A7Q6PXP3 512 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 HIST2H3AQ71DI3 136 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 LHFPL4Q7Z7J7 247 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 C11orf53Q8IXP5 236 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 GOLGA6L1Q8N7Z2 621 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 LRRC75AQ8NAA5 344 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 OR9Q1Q8NGQ5 310 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 RPS4Y2Q8TD47 263 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 C12orf43Q96C57 262 aaKnown RBP11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 MYLK2Q9H1R3 596 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 RNPEPL1Q9HAU8 725 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 ADA2Q9NZK5 511 aa11.09□□□□□ -0.63
NKX3-1-202ENST00000523261 TEX13CA0A0J9YWL9 993 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 FAM90A8PA6NJQ4 464 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 JTBO76095 146 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 IDO1P14902 403 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 CD247P20963 164 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 POLR2JP52435 117 aaKnown RBP11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 DGUOKQ16854 277 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 KRTAP27-1Q3LI81 207 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 KCTD18Q6PI47 426 aaPredicted RBP11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 MKXQ8IYA7 352 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 OR51D1Q8NGF3 324 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 OR9I1Q8NGQ6 314 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 ZNF649Q9BS31 505 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 IKZF5Q9H5V7 419 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 WDR55Q9H6Y2 383 aaPredicted RBP11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 PNPOQ9NVS9 261 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 ZIM2Q9NZV7 527 aa11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 SLC25A10Q9UBX3 287 aaPredicted RBP11.08□□□□□ -0.64
NKX3-1-202ENST00000523261 VIMP08670 466 aaKnown RBP11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 ACSM4P0C7M7 580 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 SLC1A6P48664 564 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 LGALS4P56470 323 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 MALLQ13021 153 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 WHAMMP3Q1A5X7 153 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 LRIF1Q5T3J3 769 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 MRPL21Q7Z2W9 205 aaKnown RBP11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 WDR86Q86TI4 376 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 NAA40Q86UY6 237 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 OR5T2Q8NGG2 359 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 TMEM239Q8WW34 195 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 P2RX4Q99571 388 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 ABCB10Q9NRK6 738 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 SLAMF8Q9P0V8 285 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 GMEB1Q9Y692 573 aa11.07□□□□□ -0.64
NKX3-1-202ENST00000523261 M0QX08 132 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 GLCEO94923 617 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 TFF1P04155 84 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 LCATP04180 440 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 NDUFB7P17568 137 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 POU1F1P28069 291 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 LUMP51884 338 aaPredicted RBP11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 CAV3P56539 151 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 WDR82Q6UXN9 313 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 ZNF788Q6ZQV5 615 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 GLB1L2Q8IW92 636 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 IFT20Q8IY31 132 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 KIRREL3Q8IZU9 778 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 GJC3Q8NFK1 279 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 OR52H1Q8NGJ2 320 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 UBLCP1Q8WVY7 318 aaPredicted RBP11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 LYZL4Q96KX0 146 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 GAFA1Q96PS6 74 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 DNTTIP1Q9H147 329 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 HEXA-AS1Q9H8Q6 139 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 EDA2RQ9HAV5 297 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 ELL3Q9HB65 397 aaPredicted RBP11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 KCNK9Q9NPC2 374 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 SDR39U1Q9NRG7 319 aaPredicted RBP11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 C14orf119Q9NWQ9 140 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 MRPL15Q9P015 296 aaKnown RBP11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 ZNF391Q9UJN7 358 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 COA3Q9Y2R0 106 aaPredicted RBP11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 LHFPL6Q9Y693 200 aa11.06□□□□□ -0.64
NKX3-1-202ENST00000523261 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 TLDC2A0PJX2 215 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 F5H5K5 113 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 GPX2P18283 190 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 PPIBP23284 216 aaKnown RBP11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 COX7A1P24310 79 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 GRK5P34947 590 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 ECI1P42126 302 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 CSNK2BP67870 215 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 MZT1Q08AG7 82 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 FHL1Q13642 323 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 KCNMB1Q16558 191 aa11.05□□□□□ -0.64
NKX3-1-202ENST00000523261 MESTQ5EB52 335 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms