RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 RIMS3Q9UJD0 308 aa5.16□□□□□ -1.58
PABPC1-220ENST00000522658 VPREB3Q9UKI3 123 aa5.16□□□□□ -1.58
PABPC1-220ENST00000522658 TMCC3Q9ULS5 477 aa5.16□□□□□ -1.58
PABPC1-220ENST00000522658 STARD10Q9Y365 291 aa5.16□□□□□ -1.58
PABPC1-220ENST00000522658 TGP01266 2768 aa5.15□□□□□ -1.58
PABPC1-220ENST00000522658 TEX13CA0A0J9YWL9 993 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 A0A0U1RQK1 487 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 CENPVL3A0A0U1RRI6 287 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 OOEPA6NGQ2 149 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 GGT3PA6NGU5 568 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 NKX6-3A6NJ46 265 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 IQCF6A8MYZ5 107 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 G3V4G9 280 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 LGALS8O00214 317 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 FBP2O00757 339 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 SLC16A7O60669 478 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 SHOX2O60902 331 aaPredicted RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 FAM20BO75063 409 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 FSTL3O95633 263 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 HLA-DQA2P01906 255 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 OPN1MWP04001 364 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 THY1P04216 161 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 IFNW1P05000 195 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 OPN1MW2P0DN77 364 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 OPN1MW3P0DN78 364 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 HOXB9P17482 250 aaPredicted RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 PAICSP22234 425 aaKnown RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 CRABP1P29762 137 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 GRK5P34947 590 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 GGT2P36268 569 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 SLC9A3P48764 834 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 MRPL19P49406 292 aaKnown RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 ERFP50548 548 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 PROK1P58294 105 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 MAGOHP61326 146 aaKnown RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 ARF6P62330 175 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 PAX2Q02962 417 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 KRR1Q13601 381 aaKnown RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 BLMHQ13867 455 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 CYLC2Q14093 348 aaPredicted RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 HERPUD1Q15011 391 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 FAM201AQ5SY85 155 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 PRAMEF6Q5VXH4 476 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 SFRP4Q6FHJ7 346 aaPredicted RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 WDR93Q6P2C0 686 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 C11orf88Q6PI97 169 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 EPGNQ6UW88 154 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 RHOUQ7L0Q8 258 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 SLC36A1Q7Z2H8 476 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 VMO1Q7Z5L0 202 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 CYP4Z1Q86W10 505 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 GLB1L2Q8IW92 636 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 C10orf111Q8N326 155 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 C19orf18Q8NEA5 215 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 OR2AJ1Q8NGZ0 328 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 NPRL2Q8WTW4 380 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 H1FXQ92522 213 aaKnown RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 SLC7A6Q92536 515 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 TAMM41Q96BW9 452 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 PRRC1Q96M27 445 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 PITX2Q99697 317 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 COQ7Q99807 217 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 NSRP1Q9H0G5 558 aaKnown RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 FAM234AQ9H0X4 552 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 PRDM13Q9H4Q3 707 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 IKZF5Q9H5V7 419 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 WDR76Q9H967 626 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 C20orf141Q9NUB4 165 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 RPS6KA6Q9UK32 745 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 TMEM5Q9Y2B1 443 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 DMRT1Q9Y5R6 373 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 KPTNQ9Y664 436 aa5.15□□□□□ -1.59
PABPC1-220ENST00000522658 V9GYY5 206 aaPredicted RBP5.15□□□□□ -1.59
PABPC1-220ENST00000522658 TET2Q6N021 2002 aaPredicted RBP5.14□□□□□ -1.59
PABPC1-220ENST00000522658 ARHGAP32A7KAX9 2087 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 TRBV5-3A0A0A0MS03 114 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 TRBV23-1A0A0A0MS06 115 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 ZNF816-ZNF321PA0A0X1KG74 233 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 A0A1W2PQ09 198 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 MEIOCA2RUB1 952 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 PRSS37A4D1T9 235 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 F5H5K5 113 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 H0YL77 283 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 AHCYL1O43865 530 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 RENP00797 406 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 GYPAP02724 150 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 PRB2P02812 416 aaPredicted RBP5.14□□□□□ -1.59
PABPC1-220ENST00000522658 LCATP04180 440 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 HLA-DPB1P04440 258 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 CD14P08571 375 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 TROVE2P10155 538 aaKnown RBP eCLIP5.14□□□□□ -1.59
PABPC1-220ENST00000522658 NAT1P18440 290 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 TNFRSF1BP20333 461 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 RBMXP38159 391 aaKnown RBP5.14□□□□□ -1.59
PABPC1-220ENST00000522658 CD200P41217 278 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 GPR4P46093 362 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 IER3P46695 156 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 OR1E2P47887 323 aa5.14□□□□□ -1.59
PABPC1-220ENST00000522658 RPS6KA3P51812 740 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms