RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PIK3R4Q99570 1358 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 ANKRD30AQ9BXX3 1397 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 DEPDC5O75140 1603 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 MYO3AQ8NEV4 1616 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 ALKQ9UM73 1620 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 ARHGAP31Q2M1Z3 1444 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 RIMS2Q9UQ26 1411 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 BRCA1P38398 1863 aaKnown RBP2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 NCOA2Q15596 1464 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 KRT16P08779 473 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 TCN2P20062 427 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 RAB3AP20336 220 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 GABRR2P28476 465 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 CD70P32970 193 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 MYCNOSP40205 109 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 CSKP41240 450 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 PPICP45877 212 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 BCAP31P51572 246 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 UBE2E1P51965 193 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 GFERP55789 205 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 CLDN6P56747 220 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 ESRRGP62508 458 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 ERCC8Q13216 396 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 TSC22D1Q15714 1073 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 HNRNPA1L2Q32P51 320 aaKnown RBP2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 MLIPQ5VWP3 458 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 METTL21CQ5VZV1 264 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLC35D2Q76EJ3 337 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 MYOCDQ8IZQ8 938 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 TRAM1L1Q8N609 369 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 OR6Q1Q8NGQ2 317 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 OR6N1Q8NGY5 312 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 OR51E1Q8TCB6 317 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 ISOC2Q96AB3 205 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 APH1AQ96BI3 265 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 DCPSQ96C86 337 aaKnown RBP2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 UBE2E2Q96LR5 201 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 CALN1Q9BXU9 219 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLC17A9Q9BYT1 436 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 SPNS1Q9H2V7 528 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 SYNDIG1Q9H7V2 258 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 MRM3Q9HC36 420 aaKnown RBP2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLC39A1Q9NY26 324 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 CABIN1Q9Y6J0 2220 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 PRDM15P57071 1507 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 LRPPRCP42704 1394 aaKnown RBP2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 KIF15Q9NS87 1388 aa2.86□□□□□ -1.95
HMGB1P1-201ENST00000522557 CEP162Q5TB80 1403 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 SETD5Q9C0A6 1442 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 FYCO1Q9BQS8 1478 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 A0A0B4J2E0 115 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 H3BN98 237 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 PLPP1O14494 284 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLC16A7O60669 478 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 CTNSO60931 367 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 TGM6O95932 706 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 CSTAP01040 98 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 CATP04040 527 aaKnown RBP2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 OR2B8PP59922 312 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 EIF4EBP2Q13542 120 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 TPRG1LQ5T0D9 272 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 WDR86Q86TI4 376 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 COX18Q8N8Q8 333 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 Q8N9L7 120 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 OR4A15Q8NGL6 344 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 MITD1Q8WV92 249 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 BAALCQ8WXS3 180 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 BMFQ96LC9 184 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 GPR21Q99679 349 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 UQCC2Q9BRT2 126 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 TMEM175Q9BSA9 504 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 CHID1Q9BWS9 393 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 NAA50Q9GZZ1 169 aaKnown RBP2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZMAT5Q9UDW3 170 aaKnown RBP2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 PREX2Q70Z35 1606 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 RNF17Q9BXT8 1623 aaKnown RBP2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 IQGAP1P46940 1657 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF142P52746 1687 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 ITSN2Q9NZM3 1697 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 RGS12O14924 1447 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 BLMP54132 1417 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 MYOM3Q5VTT5 1437 aa2.85□□□□□ -1.95
HMGB1P1-201ENST00000522557 ABCC3O15438 1527 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLIT1O75093 1534 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 PLXNC1O60486 1568 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 LRP6O75581 1613 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 GSTTP1A0A1W2PQM5 241 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 FAM25EA8MYX2 175 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 SNAI2O43623 268 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 GABARAPO95166 117 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 LCA5LO95447 670 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 PMCHP20382 165 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 MAGP20916 626 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 SSTR5P35346 364 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 HCAR3P49019 387 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 P2RX1P51575 399 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 MNAT1P51948 309 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 RPS23P62266 143 aaKnown RBP2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 ARG2P78540 354 aa2.84□□□□□ -1.95
HMGB1P1-201ENST00000522557 SYCNQ0VAF6 134 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms