RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 FN3KQ9H479 309 aa6.68□□□□□ -1.34
PVT1-213ENST00000522414 RPRD1BQ9NQG5 326 aaKnown RBP6.68□□□□□ -1.34
PVT1-213ENST00000522414 UFSP2Q9NUQ7 469 aa6.68□□□□□ -1.34
PVT1-213ENST00000522414 POLR1DQ9Y2S0 133 aa6.68□□□□□ -1.34
PVT1-213ENST00000522414 A8MXK9 166 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 IQCF6A8MYZ5 107 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 GADD45GO95257 159 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 FSTL3O95633 263 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 HLA-DQA2P01906 255 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 ACSM4P0C7M7 580 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 CA6P23280 308 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 OMGP23515 440 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 FPR3P25089 353 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 CRABP1P29762 137 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 PYCR1P32322 319 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 SRP9P49458 86 aaKnown RBP6.67□□□□□ -1.34
PVT1-213ENST00000522414 RGS6P49758 472 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 GNB2P62879 340 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 SRSF4Q08170 494 aaKnown RBP6.67□□□□□ -1.34
PVT1-213ENST00000522414 COX10Q12887 443 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 FOXL1Q12952 345 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 KRT72Q14CN4 511 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 KRTAP27-1Q3LI81 207 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 PRAMEF6Q5VXH4 476 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 SFRP4Q6FHJ7 346 aaPredicted RBP6.67□□□□□ -1.34
PVT1-213ENST00000522414 BRD3OSQ6XYD6 125 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 COLCA1Q6ZS62 124 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 MUC20Q8N307 709 aaPredicted RBP6.67□□□□□ -1.34
PVT1-213ENST00000522414 BOLLQ8N9W6 283 aaKnown RBP6.67□□□□□ -1.34
PVT1-213ENST00000522414 OR51L1Q8NGJ5 315 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 OR10S1Q8NGN2 331 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 CMTM5Q96DZ9 223 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 COQ7Q99807 217 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 HCAR1Q9BXC0 346 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 NDEL1Q9GZM8 345 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 HDHD2Q9H0R4 259 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 MYLK2Q9H1R3 596 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 OR52D1Q9H346 318 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 GORASP2Q9H8Y8 452 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 PNRC2Q9NPJ4 139 aaKnown RBP6.67□□□□□ -1.34
PVT1-213ENST00000522414 TNFRSF19Q9NS68 423 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 MRPL22Q9NWU5 206 aaKnown RBP6.67□□□□□ -1.34
PVT1-213ENST00000522414 PRR13Q9NZ81 148 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 MIOXQ9UGB7 285 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 OR5V1Q9UGF6 321 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 CYB5R1Q9UHQ9 305 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 TMCC3Q9ULS5 477 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 N6AMT1Q9Y5N5 214 aa6.67□□□□□ -1.34
PVT1-213ENST00000522414 WNK1Q9H4A3 2382 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 IGHV2-70DA0A0C4DH43 119 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 TVP23AA6NH52 213 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 LRRC30A6NM36 301 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 NDUFAB1O14561 156 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 ARPC3O15145 178 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 HOXA3O43365 443 aaPredicted RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 OR10H3O60404 316 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 FAM20BO75063 409 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 GMNNO75496 209 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 RENP00797 406 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 SEMG1P04279 462 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 PSKH1P11801 424 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 SLC6A6P31641 620 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 SPIBQ01892 262 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 ZNF92Q03936 586 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 DEFB112Q30KQ8 113 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 SNAI3Q3KNW1 292 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 ZNF404Q494X3 552 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 CLEC12AQ5QGZ9 265 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 ZNF362Q5T0B9 420 aaPredicted RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 WDR25Q64LD2 544 aaPredicted RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 DNM1P34Q6PK57 102 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 BTNL3Q6UXE8 466 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 LRRN1Q6UXK5 716 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 ZNF841Q6ZN19 808 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 ZBTB46Q86UZ6 589 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 PARP8Q8N3A8 854 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 FITM2Q8N6M3 262 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 CYB561A3Q8NBI2 242 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 SDR9C7Q8NEX9 313 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 OR2AJ1Q8NGZ0 328 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 FANK1Q8TC84 345 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 SPRYD4Q8WW59 207 aaPredicted RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 SLC25A28Q96A46 364 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 UPRTQ96BW1 309 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 ZMYND19Q96E35 227 aaPredicted RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 NEIL1Q96FI4 390 aaPredicted RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 CDRT15Q96T59 188 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 DDOQ99489 341 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 NUDT16L1Q9BRJ7 211 aaKnown RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 FAM107BQ9H098 131 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 EGLN3Q9H6Z9 239 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 UNKLQ9H9P5 680 aaKnown RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 SPAG4Q9NPE6 437 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 FBLN5Q9UBX5 448 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 SAMD4AQ9UPU9 718 aaKnown RBP6.66□□□□□ -1.34
PVT1-213ENST00000522414 LRCH1Q9Y2L9 728 aa6.66□□□□□ -1.34
PVT1-213ENST00000522414 CD300LBA8K4G0 201 aa6.65□□□□□ -1.34
PVT1-213ENST00000522414 C22orf46C9J442 243 aa6.65□□□□□ -1.34
PVT1-213ENST00000522414 IFNL4K9M1U5 179 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms