RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 MICBQ29980 383 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF683Q8IZ20 524 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 OSR2Q8N2R0 312 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 TERB2Q8NHR7 220 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 KTI12Q96EK9 354 aaPredicted RBP14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 WDR34Q96EX3 536 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 ARHGDIGQ99819 225 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 TUBG2Q9NRH3 451 aa14.63□□□□□ -0.07
PCDHA3-201ENST00000522353 OR5H15A6NDH6 313 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 HPNP05981 417 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 HFEQ30201 348 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 PRSS45Q7RTY3 260 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 TSEN54Q7Z6J9 526 aaKnown RBP14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 OR13G1Q8NGZ3 307 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 M1APQ8TC57 530 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 TCRBV5S2A0A599 114 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 OR10J4P0C629 311 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 PSMB3P49720 205 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 SPATA46Q5T0L3 261 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 LYPD8Q6UX82 237 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 SSX9Q7RTT3 188 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 OR4C3Q8NH37 302 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 NUBPLQ8TB37 319 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 NIPSNAP3BQ9BS92 247 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 TNFRSF12AQ9NP84 129 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 GLRX2Q9NS18 164 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 CHST2Q9Y4C5 530 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 NUP205Q92621 2012 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 HLA-HP01893 362 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 CD1EP15812 388 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 OPRM1P35372 400 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 RAB5CP51148 216 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 LFNGQ8NES3 379 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 PXT1Q8NFP0 134 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 OR13C8Q8NGS7 320 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 OIT3Q8WWZ8 545 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 A0A0B4J2E0 115 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 A0A1B0GX12 115 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 TMEM235A6NFC5 223 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 TMIGD3P0DMS9 266 aaPredicted RBP14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 CDONQ4KMG0 1287 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 THNSL2Q86YJ6 484 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 OR2Z1Q8NG97 314 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 SPSB1Q96BD6 273 aa14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 TRMT61AQ96FX7 289 aaKnown RBP14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 BSCL2Q96G97 398 aaPredicted RBP14.62□□□□□ -0.07
PCDHA3-201ENST00000522353 DNAJC13O75165 2243 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 ARPC3O15145 178 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 TMEM127O75204 238 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 SBK3P0C264 359 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 OR52I2Q8NH67 350 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 OR10D3Q8NH80 312 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 SLC39A7Q92504 469 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF251Q9BRH9 671 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 FZD5Q13467 585 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 FAHD1Q6P587 224 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 ADGRG3Q86Y34 549 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 CELA2BP08218 269 aaPredicted RBP14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 F2RP25116 425 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 ASAH1Q13510 395 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 CREB3L2Q70SY1 520 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 ARHGEF39Q8N4T4 335 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 GALMQ96C23 342 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 CIB3Q96Q77 187 aaPredicted RBP14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 ADAT1Q9BUB4 502 aaKnown RBP14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 STRCQ7RTU9 1775 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 GPX5O75715 221 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 CT45A10P0DMU9 189 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 RIMKLAQ8IXN7 391 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF225Q9UK10 706 aa14.61□□□□□ -0.07
PCDHA3-201ENST00000522353 IFITM5A6NNB3 132 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 MGMTP16455 207 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 ATF1P18846 271 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 PRICKLE4Q2TBC4 344 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 NUFIP2Q7Z417 695 aaKnown RBP14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 LOXHD1Q8IVV2 1947 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 CDAP32320 146 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 KIR2DL1P43626 348 aaPredicted RBP14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 FUT7Q11130 342 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 TMPRSS11FQ6ZWK6 438 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 PRSS42Q7Z5A4 293 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 ZNF547Q8IVP9 402 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 C17orf78Q8N4C9 275 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 SLC35B4Q969S0 331 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 USP54Q70EL1 1684 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 SHISA8B8ZZ34 492 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 NXPH3O95157 252 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 GIPP09681 153 aaPredicted RBP14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 OR5H8P0DN80 308 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 FAHP16930 419 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 TAS2R45P59539 299 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 ZXDAP98168 799 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 SPAARA0A1B0GVQ0 90 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 FXYD1O00168 92 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 ACKR3P25106 362 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 GP2P55259 537 aaKnown RBP14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 SOWAHCQ53LP3 525 aaPredicted RBP14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 VN1R4Q7Z5H5 301 aa14.6□□□□□ -0.07
PCDHA3-201ENST00000522353 OR5H6Q8NGV6 325 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms