RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-210ENST00000521932 SYS1Q8N2H4 156 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 OR10H4Q8NGA5 316 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 OR5L1Q8NGL2 311 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 OR1J1Q8NGS3 322 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 SNX33Q8WV41 574 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 IGFBPL1Q8WX77 278 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 APOBEC3DQ96AK3 386 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-210ENST00000521932 MARS2Q96GW9 593 aaKnown RBP7.16□□□□□ -1.26
VPS13B-210ENST00000521932 TMEM80Q96HE8 168 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 TBX5Q99593 518 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 RHNO1Q9BSD3 238 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 DUSP21Q9H596 190 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 SP140LQ9H930 580 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 FAIMQ9NVQ4 179 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 ERVK13-1Q9NX77 482 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 SCN3BQ9NY72 215 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 UBAP1Q9NZ09 502 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 MRM2Q9UI43 246 aaKnown RBP7.16□□□□□ -1.26
VPS13B-210ENST00000521932 CMAHPQ9Y471 501 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 PCDHGB5Q9Y5G0 923 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 CSMD2Q7Z408 3487 aa7.16□□□□□ -1.26
VPS13B-210ENST00000521932 HEATR1Q9H583 2144 aaKnown RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 CADP27708 2225 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 TMEM269A0A1B0GVZ9 245 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 TMEM129A0AVI4 362 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 MAGEB4O15481 346 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 FAM20BO75063 409 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 CD8AP01732 235 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 LCATP04180 440 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 KRT8P05787 483 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 LCKP06239 509 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 ADRA2AP08913 450 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 TACSTD2P09758 323 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 LIMS3P0CW19 117 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 LIMS4P0CW20 117 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 CRHBPP24387 322 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 SERPINF1P36955 418 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 CX3CR1P49238 355 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 FABP6P51161 128 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 PRKXP51817 358 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 RIDAP52758 137 aaKnown RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 ZNF121P58317 390 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 PPP1CBP62140 327 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 ACTA2P62736 377 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 ACTG2P63267 376 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 SLC35A2P78381 396 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 MVKQ03426 396 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 SNAI3Q3KNW1 292 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 ZNF718Q3SXZ3 478 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 RBM48Q5RL73 367 aaKnown RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 AGAP6Q5VW22 663 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 LIPNQ5VXI9 398 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 RGS7BPQ6MZT1 257 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 FBXW12Q6X9E4 464 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 RFPL4BQ6ZWI9 263 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 LHFPL3Q86UP9 236 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 FBXL14Q8N1E6 418 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 MUC15Q8N387 334 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 ZNF283Q8N7M2 679 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 ZNF540Q8NDQ6 660 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 OR52H1Q8NGJ2 320 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 SLC25A40Q8TBP6 338 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 KLF14Q8TD94 323 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 MRPL24Q96A35 216 aaKnown RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 SPSB4Q96A44 273 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 HAVCR1Q96D42 359 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 MRPL48Q96GC5 212 aaKnown RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 DOK1Q99704 481 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 YTHDF1Q9BYJ9 559 aaKnown RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 OR2J1Q9GZK6 312 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 PLK3Q9H4B4 646 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 CBLN4Q9NTU7 201 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 FAM206AQ9NX38 181 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 ZNF319Q9P2F9 582 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 FBXO9Q9UK97 447 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 IKZF2Q9UKS7 526 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 CAB39Q9Y376 341 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 EXOSC1Q9Y3B2 195 aaKnown RBP7.15□□□□□ -1.26
VPS13B-210ENST00000521932 TPRKBQ9Y3C4 175 aa7.15□□□□□ -1.26
VPS13B-210ENST00000521932 RAI1Q7Z5J4 1906 aaPredicted RBP7.15□□□□□ -1.27
VPS13B-210ENST00000521932 RTTNQ86VV8 2226 aa7.15□□□□□ -1.27
VPS13B-210ENST00000521932 PTPN13Q12923 2485 aa7.15□□□□□ -1.27
VPS13B-210ENST00000521932 HRNRQ86YZ3 2850 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-210ENST00000521932 C5orf63A6NC05 138 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 B9A039 149 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 PTGES3LE9PB15 166 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 NPIPB6E9PJ23 425 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 OVOL3O00110 214 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 XRCC2O43543 280 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 PNPP00491 289 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 IGLV3-1P01715 115 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 IGHV3-13P01766 116 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 CDK1P06493 297 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 SOD3P08294 240 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 ANOS1P23352 680 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 C21orf33P30042 268 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-210ENST00000521932 SLC6A9P48067 706 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 ETV1P50549 477 aa7.14□□□□□ -1.27
VPS13B-210ENST00000521932 OR12D2P58182 307 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms