RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 GAGE12IP0CL82 117 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 TROVE2P10155 538 aaKnown RBP eCLIP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 ARSBP15848 533 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 CBR1P16152 277 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF14P17017 642 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 PHBP35232 272 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 VHLP40337 213 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 MAGEA6P43360 314 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 NPY2RP49146 381 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF117Q03924 483 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 SLC3A1Q07837 685 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 COX10Q12887 443 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 GAGE1Q13065 139 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 GAGE4Q13068 117 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 SNTB2Q13425 540 aaKnown RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 SLC17A1Q14916 467 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 TSNQ15631 228 aaKnown RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 PDK4Q16654 411 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 NDUFAF6Q330K2 333 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 FAM122CQ6P4D5 195 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 Q6ZTC4 211 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 COMMD2Q86X83 199 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF584Q8IVC4 421 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF100Q8IYN0 542 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 RPP25LQ8N5L8 163 aaKnown RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 KLHDC1Q8N7A1 406 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 GATSQ8NAP1 163 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 MINDY2Q8NBR6 621 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 NPEPL1Q8NDH3 523 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 OR9A2Q8NGT5 310 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 GPR119Q8TDV5 335 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 SLC38A5Q8WUX1 472 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 OIT3Q8WWZ8 545 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 LZICQ8WZA0 190 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 GGHQ92820 318 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 FAM46BQ96A09 425 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 APH1AQ96BI3 265 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 TM4SF18Q96CE8 201 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 SLC47A1Q96FL8 570 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 CMTM7Q96FZ5 175 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 FAM71F1Q96KD3 344 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 LYZL4Q96KX0 146 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 FAM210AQ96ND0 272 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 TSSK2Q96PF2 358 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF385AQ96PM9 386 aaKnown RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 MTERF1Q99551 399 aaKnown RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 TSC22D3Q99576 134 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 SIKE1Q9BRV8 207 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 EFCAB11Q9BUY7 163 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 NMNAT2Q9BZQ4 307 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 PATZ1Q9HBE1 687 aaKnown RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 TANC2Q9HCD6 1990 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 DYNLRB1Q9NP97 96 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 FGFR1OP2Q9NVK5 253 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 NDUFA13Q9P0J0 144 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 RABL2AQ9UBK7 228 aaPredicted RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 FZR1Q9UM11 496 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 CFL2Q9Y281 166 aa3.06□□□□□ -1.92
VPS13B-208ENST00000521037 MRPS7Q9Y2R9 242 aaKnown RBP3.06□□□□□ -1.92
VPS13B-208ENST00000521037 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 IGHV1-69-2A0A0G2JMI3 117 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 KIR2DS1A0A191URI9 304 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 EXOC1LA0A1B0GW35 172 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 RNASEK-C17orf49H0YIS7 233 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 UPK1AO00322 258 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 MAGEB3O15480 346 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ATP6V1G1O75348 118 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 BCAS1O75363 584 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF432O94892 652 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 CH25HO95992 272 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 OPN1SWP03999 348 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 CRYBA1P05813 215 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 KRT16P08779 473 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 WNT2P09544 360 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 SMIM18P0DKX4 95 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 CPA3P15088 417 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 CSNK2A2P19784 350 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TAC1P20366 129 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 PAX7P23759 505 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 IL12BP29460 328 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ARRB2P32121 409 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 GLRXP35754 106 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 FDFT1P37268 417 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 KIR2DS4P43632 304 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 VEGFCP49767 419 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ENTPD1P49961 510 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ERVS71-1P61550 626 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TGM3Q08188 693 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF155Q12901 538 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 IL24Q13007 206 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 MRPL28Q13084 256 aaKnown RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 GK2Q14410 553 aaPredicted RBP3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ZMYND11Q15326 602 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TGFBIQ15582 683 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 OR4D1Q15615 310 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 NSUN5P1Q3KNT7 163 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 ALKBH6Q3KRA9 238 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 UGT3A2Q3SY77 523 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 TMEM41BQ5BJD5 291 aa3.05□□□□□ -1.92
VPS13B-208ENST00000521037 C10orf25Q5T742 122 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms