RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 TRIM36Q9NQ86 728 aa16.32■□□□□ 0.2
PABPC1-215ENST00000520804 TBC1D23Q9NUY8 699 aa16.32■□□□□ 0.2
PABPC1-215ENST00000520804 TRAV38-1A0A0B4J264 116 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 SRRM5B3KS81 715 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 C3orf80F5H4A9 247 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 ATP8B1O43520 1251 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 CCNB2O95067 398 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 FMO3P31513 532 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 CFHR2P36980 270 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 MAGEA2P43356 314 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 PRKXP51817 358 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 CRMP1Q14194 572 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 TAF13Q15543 124 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 OR8B8Q15620 311 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 TEX30Q5JUR7 227 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 CYP2R1Q6VVX0 501 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 SPATC1Q76KD6 591 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 ZNF511Q8NB15 262 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 AQP11Q8NBQ7 271 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 OR56B2PQ8NGI1 322 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 TMIGD2Q96BF3 282 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 PCGF1Q9BSM1 259 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 TSSK6Q9BXA6 273 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 SLITRK2Q9H156 845 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 OPA3Q9H6K4 179 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 CENPMQ9NSP4 180 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 C1orf123Q9NWV4 160 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 ACTR3BQ9P1U1 418 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 TRRAPQ9Y4A5 3859 aa16.31■□□□□ 0.2
PABPC1-215ENST00000520804 OOEPA6NGQ2 149 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 ZNF879B4DU55 563 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 P2RY10O00398 339 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 ZNF593O00488 134 aaPredicted RBP16.3■□□□□ 0.2
PABPC1-215ENST00000520804 ADAM20O43506 726 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 NDUFA2O43678 99 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 LIPFP07098 398 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 GRPP07492 148 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 SFTPBP07988 381 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 SLC2A1P11166 492 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 ATP6V1B2P21281 511 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 MDKP21741 143 aaPredicted RBP16.3■□□□□ 0.2
PABPC1-215ENST00000520804 SLC25A1P53007 311 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 MXRA7P84157 204 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 OR4Q3Q8NH05 313 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 NMNAT2Q9BZQ4 307 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 SMURF1Q9HCE7 757 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 NOX4Q9NPH5 578 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 BAIAP2Q9UQB8 552 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 ARL2BPQ9Y2Y0 163 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 N6AMT1Q9Y5N5 214 aa16.3■□□□□ 0.2
PABPC1-215ENST00000520804 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.29■□□□□ 0.2
PABPC1-215ENST00000520804 ZNF878C9JN71 531 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 XRCC2O43543 280 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 GYPBP06028 91 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 CLUP10909 449 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 MMP9P14780 707 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 SPI1P17947 270 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 MZT1Q08AG7 82 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 PPP1R8Q12972 351 aaKnown RBP16.29■□□□□ 0.2
PABPC1-215ENST00000520804 RUSC1-AS1Q66K80 236 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 Q6YL49 198 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 ZNF826PQ6ZT77 177 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 GCSAMQ8N6F7 178 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 SPSB4Q96A44 273 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 TBX15Q96SF7 602 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 C14orf119Q9NWQ9 140 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 KIF17Q9P2E2 1029 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 MMP24Q9Y5R2 645 aa16.29■□□□□ 0.2
PABPC1-215ENST00000520804 TCRBV5S2A0A599 114 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 A6NLC8 198 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 DCTN3O75935 186 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 TOX4O94842 621 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 LHBP01229 141 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 GYPAP02724 150 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 OMGP23515 440 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 DDOSTP39656 456 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 BLVRAP53004 296 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 PIGWQ7Z7B1 504 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 PNLDC1Q8NA58 520 aaKnown RBP16.28■□□□□ 0.2
PABPC1-215ENST00000520804 OR2T33Q8NG76 320 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 OR6K6Q8NGW6 343 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 WDFY2Q96P53 400 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 MAGIXQ9H6Y5 334 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 ARMC1Q9NVT9 282 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 MEGF8Q7Z7M0 2845 aa16.28■□□□□ 0.2
PABPC1-215ENST00000520804 PKD1L1Q8TDX9 2849 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 CENPVL3A0A0U1RRI6 287 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 hCG_1807616A0A1W2PRN6 198 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 DHRS12A0PJE2 317 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 FAM181BA6NEQ2 426 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 ANKRD30BLA7E2S9 258 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 KCNAB3O43448 404 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 SOX14O95416 240 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 SLC15A1P46059 708 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 GRB2P62993 217 aaKnown RBP16.27■□□□□ 0.2
PABPC1-215ENST00000520804 MICAQ29983 383 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 LINC01590Q5TEZ4 76 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 TEX36Q5VZQ5 186 aa16.27■□□□□ 0.2
PABPC1-215ENST00000520804 FAM90A1Q86YD7 464 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms