RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 PPP1R2P9O14990 202 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 AGPAT2O15120 278 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 POLR1CO15160 346 aaPredicted RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 ANXA5P08758 320 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 RRM2P31350 389 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 NSG1P42857 185 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 MAGEA6P43360 314 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 SERPINB9P50453 376 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 CCL23P55773 120 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 EIF3EP60228 445 aaKnown RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 IGLV3-21P80748 117 aaPredicted RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 POU6F1Q14863 301 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 TTC33Q6PID6 262 aaPredicted RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 ZNF773Q6PK81 442 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 IDO2Q6ZQW0 420 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 Q6ZSR3 168 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 P2RY8Q86VZ1 359 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 RALGPS2Q86X27 583 aaPredicted RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 CEND1Q8N111 149 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 NATD1Q8N6N6 113 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 ZNF740Q8NDX6 193 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 OR9G1Q8NH87 305 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 CAPSLQ8WWF8 208 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 MARC2Q969Z3 335 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 ASB9Q96DX5 294 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 CCDC126Q96EE4 140 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 RACGAP1Q9H0H5 632 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 AUNIPQ9H7T9 357 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 UBE2ZQ9H832 354 aaPredicted RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 ANKHQ9HCJ1 492 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 MRPL47Q9HD33 250 aaKnown RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 IL26Q9NPH9 171 aa5.37□□□□□ -1.55
LSM1-202ENST00000520286 MRPL40Q9NQ50 206 aaKnown RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 ZMAT5Q9UDW3 170 aaKnown RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 MARCOQ9UEW3 520 aaPredicted RBP5.37□□□□□ -1.55
LSM1-202ENST00000520286 C1orf232A0A0U1RR37 186 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 FAM159BA6NKW6 160 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 PLIN3O60664 434 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 OR2F2O95006 317 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 SLC25A27O95847 323 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 TSPAN13O95857 204 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 STAG3L3P0CL85 134 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 NELFEP18615 380 aaKnown RBP5.36□□□□□ -1.55
LSM1-202ENST00000520286 TCN1P20061 433 aaPredicted RBP5.36□□□□□ -1.55
LSM1-202ENST00000520286 COX7A1P24310 79 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 CD40LGP29965 261 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 RPL22P35268 128 aaKnown RBP5.36□□□□□ -1.55
LSM1-202ENST00000520286 CDKN2BP42772 138 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 NAMPTP43490 491 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 TUFMP49411 452 aaKnown RBP5.36□□□□□ -1.55
LSM1-202ENST00000520286 NUDT2P50583 147 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 DLX1P56177 255 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 AQP6Q13520 282 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 ARFRP1Q13795 201 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 CDK10Q15131 360 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 NRF1Q16656 503 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 GPR157Q5UAW9 335 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 XAF1Q6GPH4 301 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 PPP1R2P3Q6NXS1 205 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 TMEM220Q6QAJ8 160 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 TMCO2Q7Z6W1 182 aaPredicted RBP5.36□□□□□ -1.55
LSM1-202ENST00000520286 SCD5Q86SK9 330 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 PDIK1LQ8N165 341 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 ZNF786Q8N393 782 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 COMMD1Q8N668 190 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 C14orf178Q8N769 122 aaPredicted RBP5.36□□□□□ -1.55
LSM1-202ENST00000520286 OR6Q1Q8NGQ2 317 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 OR1S2Q8NGQ3 325 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 C7orf33Q8WU49 177 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 PHF10Q8WUB8 498 aaKnown RBP5.36□□□□□ -1.55
LSM1-202ENST00000520286 ACOT11Q8WXI4 607 aaPredicted RBP5.36□□□□□ -1.55
LSM1-202ENST00000520286 FGF14Q92915 247 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 PYGO2Q9BRQ0 406 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 FANCEQ9HB96 536 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 DIABLOQ9NR28 239 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 PTTG3PQ9NZH4 202 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 CHD9Q3L8U1 2897 aa5.36□□□□□ -1.55
LSM1-202ENST00000520286 PHIPQ8WWQ0 1821 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 KIR2DL5BA0A0G2JN68 375 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 KIR2DL5BA0A0G2JPC4 375 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 A0A0J9YXY3 114 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 AIM2O14862 343 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 UGT2B11O75310 529 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 ZMPSTE24O75844 475 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 KCNK2O95069 426 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 GABARAPO95166 117 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 VAPBO95292 243 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 PTTG1O95997 202 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 GNAO1P09471 354 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 IL32P24001 234 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 SERPINB1P30740 379 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 POLR2IP36954 125 aaKnown RBP5.35□□□□□ -1.55
LSM1-202ENST00000520286 NAA10P41227 235 aaPredicted RBP5.35□□□□□ -1.55
LSM1-202ENST00000520286 MAGEA3P43357 314 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 TFPI2P48307 235 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 RAB9AP51151 201 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 AP2S1P53680 142 aaPredicted RBP5.35□□□□□ -1.55
LSM1-202ENST00000520286 APOC4P55056 127 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 B2MP61769 119 aa5.35□□□□□ -1.55
LSM1-202ENST00000520286 SNRPFP62306 86 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms