RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 NT5DC3Q86UY8 548 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 ERO1BQ86YB8 467 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 DRAM1Q8N682 238 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 TEX9Q8N6V9 391 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 LY6G5BQ8NDX9 201 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 OR4C13Q8NGP0 309 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 ACMSDQ8TDX5 336 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 S100PBPQ96BU1 408 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 OR4K3Q96R72 315 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 RRAGDQ9NQL2 400 aaPredicted RBP0.72□□□□□ -2.29
PCM1-208ENST00000518877 AGPAT4Q9NRZ5 378 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 CA10Q9NS85 328 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 TAS2R1Q9NYW7 299 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 UXTQ9UBK9 157 aaPredicted RBP0.72□□□□□ -2.29
PCM1-208ENST00000518877 RAB23Q9ULC3 237 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 ASB3Q9Y575 518 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 DYSFO75923 2080 aa0.72□□□□□ -2.29
PCM1-208ENST00000518877 COL22A1Q8NFW1 1626 aaPredicted RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 USP47Q96K76 1375 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 C2orf16Q68DN1 1984 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 IGHV3OR16-9A0A0B4J2B5 98 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 CCL15-CCL14A0A0B4J2E2 113 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 FAM240BA0A1B0GVZ2 78 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 SYCE1LA8MT33 242 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 SLC9A3R1O14745 358 aaPredicted RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 OVOL1O14753 267 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 AIM2O14862 343 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 CLOCKO15516 846 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 SCELO95171 688 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 GABRG2P18507 467 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 TNNI1P19237 187 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 NCF2P19878 526 aaPredicted RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 TGM4P49221 684 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 CCL15Q16663 113 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 LRRC23Q53EV4 343 aaPredicted RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 PCOTHQ58A44 107 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 ZNF678Q5SXM1 525 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 KDM4DQ6B0I6 523 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 AMMECR1LQ6DCA0 310 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 MORN3Q6PF18 240 aaPredicted RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 OPN5Q6U736 354 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 RTL4Q6ZR62 310 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 CDR2LQ86X02 465 aaPredicted RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 NBPF5PQ86XG9 351 aaPredicted RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 UBE2J2Q8N2K1 259 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 CBR4Q8N4T8 237 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 SNX31Q8N9S9 440 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 C19orf18Q8NEA5 215 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 OR9K2Q8NGE7 335 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 RXFP4Q8TDU9 374 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 DYNLL2Q96FJ2 89 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 IGF2BP2-AS1Q96M15 143 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 ZNF649Q9BS31 505 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 ILKAPQ9H0C8 392 aaPredicted RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 TMEM38AQ9H6F2 299 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 LRRC40Q9H9A6 602 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 ACP6Q9NPH0 428 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 DYRK4Q9NR20 520 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 ASF1BQ9NVP2 202 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 MTCH1Q9NZJ7 389 aa0.71□□□□□ -2.3
PCM1-208ENST00000518877 CCDC59Q9P031 241 aaKnown RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 ISY1Q9ULR0 285 aaKnown RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 YARS2Q9Y2Z4 477 aaKnown RBP0.71□□□□□ -2.3
PCM1-208ENST00000518877 OR2AG2A6NM03 316 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 M0R1X1 148 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 CDC40O60508 579 aaKnown RBP eCLIP0.7□□□□□ -2.3
PCM1-208ENST00000518877 FGFR1OPO95684 399 aaKnown RBP0.7□□□□□ -2.3
PCM1-208ENST00000518877 SLC2A3P11169 496 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 USF1P22415 310 aaPredicted RBP0.7□□□□□ -2.3
PCM1-208ENST00000518877 GGT2P36268 569 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 SLC1A1P43005 524 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 ACOT2P49753 483 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 RAB7AP51149 207 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 ILKQ13418 452 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 TRAM2Q15035 370 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 ZMYND11Q15326 602 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 TSC22D1Q15714 1073 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 PSMD5Q16401 504 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 ZNF829Q3KNS6 432 aaPredicted RBP0.7□□□□□ -2.3
PCM1-208ENST00000518877 HSP90AB3PQ58FF7 597 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 TPTE2P1Q5T6R2 138 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 PRAMEF20Q5VT98 475 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 C9orf135Q5VTT2 229 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 ZNF660Q6AZW8 331 aaPredicted RBP0.7□□□□□ -2.3
PCM1-208ENST00000518877 ZNF470Q6ECI4 717 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 RUFY3Q7L099 469 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 SLC16A14Q7RTX9 510 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 GTPBP8Q8N3Z3 284 aaPredicted RBP0.7□□□□□ -2.3
PCM1-208ENST00000518877 OR10W1Q8NGF6 305 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 OR5AR1Q8NGP9 310 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 OR6Q1Q8NGQ2 317 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 OR52N1Q8NH53 320 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 FBXO32Q969P5 355 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 HAUS1Q96CS2 278 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 KCNS3Q9BQ31 491 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 C1orf50Q9BV19 199 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 MS4A8Q9BY19 250 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 SND1-IT1Q9HBX3 110 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 ZNF302Q9NR11 478 aa0.7□□□□□ -2.3
PCM1-208ENST00000518877 RGS18Q9NS28 235 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms