RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ETS1P14921 441 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZNF25P17030 456 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 MPP1Q00013 466 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 CAMK2DQ13557 499 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 ELOCQ15369 112 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 SPATA19Q7Z5L4 167 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 RPS19BP1Q86WX3 136 aaKnown RBP-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 PUSL1Q8N0Z8 303 aaKnown RBP-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 MS4A15Q8N5U1 240 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 SAMD3Q8N6K7 520 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 OR10AD1Q8NGE0 317 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 OR2K2Q8NGT1 345 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 RARRES2Q99969 163 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 TMEM243Q9BU79 118 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZNF436Q9C0F3 470 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 LRRN3Q9H3W5 708 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 RHOJQ9H4E5 214 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 SND1-IT1Q9HBX3 110 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 C8orf4Q9NR00 106 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 CGNQ9P2M7 1197 aaKnown RBP-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 VANGL2Q9ULK5 521 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 TMEM5Q9Y2B1 443 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 PPIL1Q9Y3C6 166 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZNF532Q9HCE3 1301 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 PLXNA4Q9HCM2 1894 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 E9PMD0 336 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 SGK494L7N484 410 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 SLC30A4O14863 429 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 PSIP1O75475 530 aaKnown RBP-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 GNSP15586 552 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 SERPINB6P35237 376 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 P2RY2P41231 377 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 CEBPDP49716 269 aaPredicted RBP-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCZ1BP86790 482 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCZ1P86791 482 aaPredicted RBP-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 TSTA3Q13630 321 aaPredicted RBP-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 SELPLGQ14242 412 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 HSP90AB4PQ58FF6 505 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 TEX36Q5VZQ5 186 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 FAM71F2Q6NXP2 309 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZCCHC23Q6ZST2 131 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 LPCAT2Q7L5N7 544 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCDC136Q96JN2 1154 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 CAPZA3Q96KX2 299 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZBTB18Q99592 522 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 TSPYL1Q9H0U9 437 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 RPAP3Q9H6T3 665 aaPredicted RBP-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 TMEM38BQ9NVV0 291 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 P2RX2Q9UBL9 471 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 TBK1Q9UHD2 729 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 PUS1Q9Y606 427 aaKnown RBP eCLIP-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 DNAH6Q9C0G6 4158 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 MROH5Q6ZUA9 1318 aa-2.75□□□□□ -2.85
RNU6-539P-201ENST00000516665 LOC102725191A0A1B0GVB3 256 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 DHRS12A0PJE2 317 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 ISPDA4D126 451 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 RNF113AO15541 343 aaKnown RBP-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 TTI1O43156 1089 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 SURF6O75683 361 aaKnown RBP-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 CALM1P0DP23 149 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 CALM2P0DP24 149 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 CALM3P0DP25 149 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 RNASE3P12724 160 aaKnown RBP-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCL5P13501 91 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZNF3P17036 446 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 SPINT3P49223 89 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 SLC26A5P58743 744 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 OSTNP61366 133 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 CLINT1Q14677 625 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 NCF4Q15080 339 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 Q1T7F1 81 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 SLC36A2Q495M3 483 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 RILPL1Q5EBL4 403 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCNJQ5T5M9 372 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCDC83Q8IWF9 413 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZNF738Q8NE65 137 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 PINX1Q96BK5 328 aaKnown RBP-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 TM6SF2Q9BZW4 377 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 REEP4Q9H6H4 257 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 TRMT112Q9UI30 125 aaKnown RBP-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 VPS28Q9UK41 221 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 COPS3Q9UNS2 423 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 ST3GAL6Q9Y274 331 aa-2.76□□□□□ -2.85
RNU6-539P-201ENST00000516665 SCN9AQ15858 1988 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 EML6Q6ZMW3 1958 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 SMIM26A0A096LP01 95 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 IGHV3-21A0A0B4J1V1 117 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZNF99A8MXY4 864 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 MGRN1O60291 552 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 PFKFB2O60825 505 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 LRATO95237 230 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 ANXA4P09525 319 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 RGS6P49758 472 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 RPL14P50914 215 aaKnown RBP-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 BCL2A1Q16548 175 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 CENPPQ6IPU0 288 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 NIPAL1Q6NVV3 410 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 AGTRAPQ6RW13 159 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 ZFP82Q8N141 532 aa-2.77□□□□□ -2.85
RNU6-539P-201ENST00000516665 LIX1Q8N485 282 aa-2.77□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms