RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 OR4C3Q8NH37 302 aa12.96□□□□□ -0.33
TRIO-222ENST00000515144 FOXB1Q99853 325 aa12.96□□□□□ -0.33
TRIO-222ENST00000515144 IKZF5Q9H5V7 419 aa12.96□□□□□ -0.33
TRIO-222ENST00000515144 UBE2IP63279 158 aaKnown RBP12.96□□□□□ -0.34
TRIO-222ENST00000515144 KDM4DQ6B0I6 523 aa12.96□□□□□ -0.34
TRIO-222ENST00000515144 C1QTNF3Q9BXJ4 246 aa12.96□□□□□ -0.34
TRIO-222ENST00000515144 CLEC5AQ9NY25 188 aa12.96□□□□□ -0.34
TRIO-222ENST00000515144 SLC22A23A1A5C7 686 aa12.96□□□□□ -0.34
TRIO-222ENST00000515144 SH2D7A6NKC9 451 aaPredicted RBP12.96□□□□□ -0.34
TRIO-222ENST00000515144 CT62P0C5K7 136 aa12.96□□□□□ -0.34
TRIO-222ENST00000515144 ACVR1Q04771 509 aa12.96□□□□□ -0.34
TRIO-222ENST00000515144 BHLHA15Q7RTS1 189 aaPredicted RBP12.96□□□□□ -0.34
TRIO-222ENST00000515144 B3GALT5Q9Y2C3 310 aa12.96□□□□□ -0.34
TRIO-222ENST00000515144 C17orf112F2Z3M2 114 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 TMPRSS3P57727 454 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 CMTM4Q8IZR5 234 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 NKAIN3Q8N8D7 197 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 TOX4O94842 621 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 ALOX5APP20292 161 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 MESP2Q0VG99 397 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 RBMS2Q15434 407 aaKnown RBP12.95□□□□□ -0.34
TRIO-222ENST00000515144 NKG7Q16617 165 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 XKR7Q5GH72 579 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 SPANXN5Q5MJ07 72 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 OR2L13Q8N349 312 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 ST3GAL6Q9Y274 331 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 TRBV5-4A0A0C4DH59 114 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 A0A1B0GTQ1 180 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 ANGPTL7O43827 346 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 FZD6O60353 706 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 GMDSO60547 372 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 ASCL1P50553 236 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRIO-222ENST00000515144 OR1S2Q8NGQ3 325 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 TRABD2BA6NFA1 517 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 IAPPP10997 89 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 GPX2P18283 190 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 PAX6P26367 422 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 TNFAIP6P98066 277 aaPredicted RBP12.95□□□□□ -0.34
TRIO-222ENST00000515144 ZNF117Q03924 483 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 TGIF1Q15583 401 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 OR10K2Q6IF99 312 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 OR2AE1Q8NHA4 323 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 SLC39A9Q9NUM3 307 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 GLTPQ9NZD2 209 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 FNDC1Q4ZHG4 1894 aaPredicted RBP12.95□□□□□ -0.34
TRIO-222ENST00000515144 OR5G3P0C626 314 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 PI3P19957 117 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 HBG1P69891 147 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 HBG2P69892 147 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 EMC4Q5J8M3 183 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 PLEKHF2Q9H8W4 249 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 BCO1Q9HAY6 547 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 CEP250Q9BV73 2442 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 A0A1W2PS29 197 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 SP9P0CG40 484 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 RAE1P78406 368 aaKnown RBP12.95□□□□□ -0.34
TRIO-222ENST00000515144 MPPED2Q15777 294 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 C20orf196Q8IYI0 205 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 FGF11Q92914 225 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 TAS2R5Q9NYW4 299 aa12.95□□□□□ -0.34
TRIO-222ENST00000515144 WDR74Q6RFH5 385 aaPredicted RBP12.94□□□□□ -0.34
TRIO-222ENST00000515144 OR1M1Q8NGA1 313 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 TRGV10A0A0A0MS01 117 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 SOX15O60248 233 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 ACTBL2Q562R1 376 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 LIMS2Q7Z4I7 341 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 PRDM7Q9NQW5 492 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 GOSR1O95249 250 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 KIR2DL1P43626 348 aaPredicted RBP12.94□□□□□ -0.34
TRIO-222ENST00000515144 TMPRSS13Q9BYE2 586 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 UNKLQ9H9P5 680 aaKnown RBP12.94□□□□□ -0.34
TRIO-222ENST00000515144 HRKO00198 91 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 APELAP0DMC3 54 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 ACSM1Q08AH1 577 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 SNTB1Q13884 538 aaKnown RBP12.94□□□□□ -0.34
TRIO-222ENST00000515144 MICBQ29980 383 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 GPRIN2O60269 458 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 FADS1O60427 444 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 PAPLNO95428 1278 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 CD3EP07766 207 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 ZNF774Q6NX45 483 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 LPCAT3Q6P1A2 487 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 ARL11Q969Q4 196 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 TATDN3Q17R31 274 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 SMIM21Q3B7S5 101 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 CLVS2Q5SYC1 327 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 STUMQ69YW2 141 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 ZNF620Q6ZNG0 422 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 LACC1Q8IV20 430 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 GALMQ96C23 342 aa12.94□□□□□ -0.34
TRIO-222ENST00000515144 ZNF2Q9BSG1 426 aaPredicted RBP12.94□□□□□ -0.34
TRIO-222ENST00000515144 METTL17Q9H7H0 456 aaPredicted RBP12.94□□□□□ -0.34
TRIO-222ENST00000515144 SUB1P53999 127 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRIO-222ENST00000515144 C17orf78Q8N4C9 275 aa12.93□□□□□ -0.34
TRIO-222ENST00000515144 ALG14Q96F25 216 aa12.93□□□□□ -0.34
TRIO-222ENST00000515144 S1PR3Q99500 378 aa12.93□□□□□ -0.34
TRIO-222ENST00000515144 PURGQ9UJV8 347 aaKnown RBP12.93□□□□□ -0.34
TRIO-222ENST00000515144 IGKV3-7A0A075B6H7 116 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms