RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 EAF1Q96JC9 268 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-219ENST00000514743 NKX3-1Q99801 234 aaPredicted RBP6.7□□□□□ -1.34
PDLIM5-219ENST00000514743 ANGPTL4Q9BY76 406 aa6.7□□□□□ -1.34
PDLIM5-219ENST00000514743 MEGF9Q9H1U4 602 aa6.7□□□□□ -1.34
PDLIM5-219ENST00000514743 SEC61A2Q9H9S3 476 aa6.7□□□□□ -1.34
PDLIM5-219ENST00000514743 FN3KRPQ9HA64 309 aa6.7□□□□□ -1.34
PDLIM5-219ENST00000514743 MRPS18AQ9NVS2 196 aaKnown RBP6.7□□□□□ -1.34
PDLIM5-219ENST00000514743 A0A087WUJ7 227 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CPSF4LA6NMK7 179 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 PROB1E7EW31 1015 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF670-ZNF695F2Z2N8 137 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CNIH1O95406 144 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CST4P01036 141 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 NR2F6P10588 404 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 UCP1P25874 307 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 S100A10P60903 97 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 RPS15AP62244 130 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 EIF5AP63241 154 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 RUNX2Q13950 521 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CRMP1Q14194 572 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 C22orf42Q6IC83 251 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 SMARCD3Q6STE5 483 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ENPP7Q6UWV6 458 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TMEM91Q6ZNR0 172 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 LINC00471Q8N535 108 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 SLC35G3Q8N808 338 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 SLC16A11Q8NCK7 471 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TSACCQ96A04 125 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 SLC25A46Q96AG3 418 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TMEM45BQ96B21 275 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 HSPA12BQ96MM6 686 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 NRIP2Q9BQI9 281 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CNIH4Q9P003 139 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 PILRAQ9UKJ1 303 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 RAB22AQ9UL26 194 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 MTCH2Q9Y6C9 303 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TRAV34A0A0B4J273 112 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TMEM235A6NFC5 223 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 C19orf67A6NJJ6 358 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TNFSF14O43557 240 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 KLF8O95600 359 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CH25HO95992 272 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 RLN1P04808 185 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2ABP04908 130 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CALCBP10092 127 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 GNRHRP30968 328 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 MLLT11Q13015 90 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ELAVL1Q15717 326 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TMEM249Q2WGJ8 235 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CLEC12AQ5QGZ9 265 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 PRR27Q6MZM9 219 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 MFSD12Q6NUT3 480 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 DRAM2Q6UX65 266 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST3H2AQ7L7L0 130 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 LINC01551Q86U37 167 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 OR2L13Q8N349 312 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF485Q8NCK3 441 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 RPLP0P6Q8NHW5 317 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ASB17Q8WXJ9 295 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2ACQ93077 130 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 WFDC1Q9HC57 220 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ACKR4Q9NPB9 350 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 UBQLN4Q9NRR5 601 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF701Q9NV72 531 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 KLHL28Q9NXS3 571 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 LRFN1Q9P244 771 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 RPS6KB2Q9UBS0 482 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 MSRAQ9UJ68 235 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TMEM269A0A1B0GVZ9 245 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 GALR3O60755 368 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TGFAP01135 160 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 HPXP02790 462 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 PSMA6P60900 246 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CBFBQ13951 182 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 RAB35Q15286 201 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF628Q5EBL2 1059 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 FHL5Q5TD97 284 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 OR9K2Q8NGE7 335 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 TMEM163Q8TC26 289 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 FAM46AQ96IP4 442 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 HIST1H2BLQ99880 126 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ZNF649Q9BS31 505 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 CACNG6Q9BXT2 260 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 ACTR3CQ9C0K3 210 aaPredicted RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 NOX3Q9HBY0 568 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 YAE1D1Q9NRH1 226 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 B3GAT1Q9P2W7 334 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 SF3B6Q9Y3B4 125 aaKnown RBP6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 FAM96BQ9Y3D0 163 aa6.69□□□□□ -1.34
PDLIM5-219ENST00000514743 DHRS7CA6NNS2 312 aa6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 HMSDA8MTL9 139 aa6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 ARPC1BO15143 372 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 RDH16O75452 317 aa6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 RAB36O95755 333 aa6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 SFTA3P0C7M3 94 aa6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 ACP2P11117 423 aa6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 CPEP16870 476 aa6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 PSMA1P25786 263 aaKnown RBP6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 LGALS7P47929 136 aa6.68□□□□□ -1.34
PDLIM5-219ENST00000514743 LSSP48449 732 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms