RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CCNKO75909 580 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 ALDOBP05062 364 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 MMP7P09237 267 aaPredicted RBP13.07□□□□□ -0.32
VCAN-211ENST00000513984 GSTT2BP0CG30 244 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 THBS4P35443 961 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 PSG4Q00888 419 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 ZNF627Q7L945 461 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 CHMP1BQ7LBR1 199 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 SKA3Q8IX90 412 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 SSC4DQ8WTU2 575 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 DEDD2Q8WXF8 326 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 C10orf35Q96D05 121 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 WNT5BQ9H1J7 359 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 OR10A2Q9H208 303 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 FBLN5Q9UBX5 448 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 NUBP2Q9Y5Y2 271 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 ALG5Q9Y673 324 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 CELSR3Q9NYQ7 3312 aa13.07□□□□□ -0.32
VCAN-211ENST00000513984 TRAV18A0A075B6X5 111 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 NAP1L6A6NFF2 107 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 ZNF587BE7ETH6 402 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 H7C417 338 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 ALX3O95076 343 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 IGHV3-9P01782 118 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 IGHG3P01860 377 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 MT-ND4P03905 459 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 TCRBP04435 133 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 GIFP27352 417 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 ZNF93P35789 620 aaPredicted RBP13.06□□□□□ -0.32
VCAN-211ENST00000513984 HTR5AP47898 357 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 QRFPP83859 136 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 PMP22Q01453 160 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 HGFACQ04756 655 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 DEFB109BQ30KR1 87 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 SNAI3Q3KNW1 292 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 SFRP5Q5T4F7 317 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 OLFML2AQ68BL7 652 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 ASCL5Q7RTU5 278 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 AKR7LQ8NHP1 331 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 FGFBP3Q8TAT2 258 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 CACNG6Q9BXT2 260 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 HRASLSQ9HDD0 168 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 MTFP1Q9UDX5 166 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 ATPIF1Q9UII2 106 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 RAB22AQ9UL26 194 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 TRAV17A0A0B4J275 112 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 DHRS7CA6NNS2 312 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 MTRF1O75570 445 aaKnown RBP13.06□□□□□ -0.32
VCAN-211ENST00000513984 PATE4P0C8F1 98 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 MCEMP1Q8IX19 187 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 PAQR4Q8N4S7 273 aaPredicted RBP13.06□□□□□ -0.32
VCAN-211ENST00000513984 UBASH3BQ8TF42 649 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 PP6455Q8WZ26 134 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 APH1AQ96BI3 265 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 GP6Q9HCN6 339 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 NUDT15Q9NV35 164 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 KCNMB2Q9Y691 235 aa13.06□□□□□ -0.32
VCAN-211ENST00000513984 IGKV1-9A0A0C4DH69 117 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 PRF1P14222 555 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 ZNF24P17028 368 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 RAG2P55895 527 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 ARF1P84077 181 aaKnown RBP13.05□□□□□ -0.32
VCAN-211ENST00000513984 SSBP1Q04837 148 aaKnown RBP13.05□□□□□ -0.32
VCAN-211ENST00000513984 PMPCAQ10713 525 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 UNC119Q13432 240 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 OR10K2Q6IF99 312 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 UTS2BQ765I0 119 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 SGK3Q96BR1 496 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 ST6GAL2Q96JF0 529 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 CHST5Q9GZS9 411 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 ZNF224Q9NZL3 707 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 MRPL15Q9P015 296 aaKnown RBP13.05□□□□□ -0.32
VCAN-211ENST00000513984 ZNF175Q9Y473 711 aa13.05□□□□□ -0.32
VCAN-211ENST00000513984 DOCK7Q96N67 2140 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 TMEM14DPA8MWL7 114 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 SULT1C2O00338 296 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 GMDSO60547 372 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 RBBP9O75884 186 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 VSIG8P0DPA2 414 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 PRSS3P35030 304 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 CCR6P51684 374 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 TMEM255AQ5JRV8 349 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 AWAT2Q6E213 333 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 RAB12Q6IQ22 244 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 OR2W3Q7Z3T1 314 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 ANGPTL5Q86XS5 388 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 GPX8Q8TED1 209 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 TAS2R8Q9NYW2 309 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 ZNF391Q9UJN7 358 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 ZNF221Q9UK13 617 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 METTL21EPA6NDL7 271 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 SLC22A20A6NK97 555 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 TGM6O95932 706 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 HCKP08631 526 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 FCGR2AP12318 317 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 FAHP16930 419 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 TBRG1Q3YBR2 411 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 ATAD3CQ5T2N8 411 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 NUFIP2Q7Z417 695 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms