RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SIGLEC11Q96RL6 698 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 PBOV1Q9GZY1 135 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 CXorf56Q9H5V9 222 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 FGF20Q9NP95 211 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 MRPS18AQ9NVS2 196 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 ERVK13-1Q9NX77 482 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 UBAP1Q9NZ09 502 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 PFDN2Q9UHV9 154 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 PSORS1C1Q9UIG5 152 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 R4GMQ9 66 aa8.37□□□□□ -1.07
TOPBP1-209ENST00000513818 OTOGQ6ZRI0 2925 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 IGHV3-64DA0A0J9YX35 117 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 VSTM5A8MXK1 200 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 PTGES3LE9PB15 166 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 E9PI62 339 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 OVOL3O00110 214 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 P2RY10O00398 339 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF254O75437 659 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 NCR1O76036 304 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 IGHV3-13P01766 116 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 IGHV4-39P01824 125 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 TTRP02766 147 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 C21orf33P30042 268 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 KIR3DL2P43630 455 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 MMP15P51511 669 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 ART1P52961 327 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 ATP5J2P56134 94 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 NANOS3P60323 173 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 ST3GAL4Q11206 333 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 GALEQ14376 348 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 TSTQ16762 297 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 KLHL22Q53GT1 634 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 SPRNQ5BIV9 151 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 WDR38Q5JTN6 314 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 BCL2L15Q5TBC7 163 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 XAF1Q6GPH4 301 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 UNQ6126/PRO20091Q6UXV3 157 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 FBXW12Q6X9E4 464 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 Q6ZR03 302 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 PRSS35Q8N3Z0 413 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 STX19Q8N4C7 294 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 OR10AD1Q8NGE0 317 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 SVIPQ8NHG7 77 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 OR51E1Q8TCB6 317 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 SPRYD4Q8WW59 207 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 PIGTQ969N2 578 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 PELI1Q96FA3 418 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 OR10A2Q9H208 303 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 PPP1R3EQ9H7J1 279 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 NIPAL2Q9H841 368 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 G6PC2Q9NQR9 355 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 GPR84Q9NQS5 396 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 OR52A1Q9UKL2 312 aa8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 DIMT1Q9UNQ2 313 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-209ENST00000513818 hCG_38984A0A1B0GV85 526 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 EFCAB10A6NFE3 127 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 GGT3PA6NGU5 568 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 CD300LBA8K4G0 201 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 H0YL77 283 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 H3BSA7 217 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 J3QW42 95 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 MLNRO43193 412 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 XRCC2O43543 280 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 LMX1BO60663 402 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 SULT1C4O75897 302 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 LALBAP00709 142 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 IGHV1-46P01743 117 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 APOC1P02654 83 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 MT-ND2P03891 347 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 HLA-DPB1P04440 258 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 PIPP12273 146 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 RAC2P15153 192 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 SELEP16581 610 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 MYL12AP19105 171 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 KITLGP21583 273 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 ACKR3P25106 362 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 PPOXP50336 477 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF81P51508 661 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 GTF2A1P52655 376 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 SELENOVP59797 346 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 ACTA2P62736 377 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 ACTG2P63267 376 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 FAM3AP98173 230 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 TNK1Q13470 666 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 DMRTC1Q5HYR2 192 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 Q5PR19 223 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 DEGS2Q6QHC5 323 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 RHOUQ7L0Q8 258 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 CATSPERDQ86XM0 798 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 KLBQ86Z14 1044 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 KRTAP1-3Q8IUG1 177 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 ZFP41Q8N8Y5 198 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 HAVCR1Q96D42 359 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 TMEM80Q96HE8 168 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 COG8Q96MW5 612 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 PLCXD1Q9NUJ7 323 aa8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 ZNF701Q9NV72 531 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-209ENST00000513818 BEX4Q9NWD9 120 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms