RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 MOB1BQ7L9L4 216 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 DPY19L4Q7Z388 723 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 COMMD6Q7Z4G1 85 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 SPAG16Q8N0X2 631 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 ZNF525Q8N782 197 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 OR5AU1Q8NGC0 362 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 AGR3Q8TD06 166 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 CA5BP1Q8WTZ4 195 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 CCDC126Q96EE4 140 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 WDR34Q96EX3 536 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 TMEM80Q96HE8 168 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 OR5B2Q96R09 309 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 KCNA7Q96RP8 456 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 NPAS2Q99743 824 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 PELOQ9BRX2 385 aaKnown RBP3.19□□□□□ -1.9
HTT-210ENST00000512909 EBPLQ9BY08 206 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 METTL7AQ9H8H3 244 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 RRAGDQ9NQL2 400 aaPredicted RBP3.19□□□□□ -1.9
HTT-210ENST00000512909 SLC35D1Q9NTN3 355 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 VPS29Q9UBQ0 182 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 LAMP5Q9UJQ1 280 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 PCTPQ9UKL6 214 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 OR10H1Q9Y4A9 318 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 ASB4Q9Y574 426 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 SCN8AQ9UQD0 1980 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 CEP295Q9C0D2 2601 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 USP24Q9UPU5 2620 aa3.19□□□□□ -1.9
HTT-210ENST00000512909 FRYQ5TBA9 3013 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 IGKV3D-11A0A0A0MRZ8 115 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 A0A0A6YYD5 115 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 C15orf38-AP3S2A0A0A6YYH1 394 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 PPIAL4CA0A0B4J2A2 164 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 SLC17A2O00624 439 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 RGS16O15492 202 aaPredicted RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 WISP3O95389 354 aaPredicted RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 AIFM1O95831 613 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 C1QAP02745 245 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 IL3P08700 152 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 PPIAL4GP0DN37 164 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 CPMP14384 443 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 IGFBP5P24593 272 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 HTR1EP28566 365 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 IL12BP29460 328 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 MPIP34949 423 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 GCKP35557 465 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 MDH1P40925 334 aaKnown RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 OR3A4PP47883 348 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 NCBP2P52298 156 aaKnown RBP eCLIP3.18□□□□□ -1.9
HTT-210ENST00000512909 PKNOX1P55347 436 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 FBXW4P57775 412 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 CXCL6P80162 114 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 TNFRSF17Q02223 184 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 ATXN7L3Q14CW9 347 aaPredicted RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 CCDC153Q494R4 210 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 TRMT12Q53H54 448 aaKnown RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 CLEC6AQ6EIG7 209 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 ASPHD2Q6ICH7 369 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 OR52E8Q6IFG1 317 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 ZYG11AQ6WRX3 759 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 TIFABQ6ZNK6 161 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 DNM1P46Q6ZS02 220 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 LHFPL4Q7Z7J7 247 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 DOLPP1Q86YN1 238 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 NUDCD3Q8IVD9 361 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 C10orf107Q8IVU9 208 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 ST13P4Q8IZP2 240 aaPredicted RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 ZCCHC7Q8N3Z6 543 aaKnown RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 APCDD1LQ8NCL9 501 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 MDS2Q8NDY4 140 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 OR2M7Q8NG81 312 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 OR52R1Q8NGF1 315 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 PNPT1Q8TCS8 783 aaKnown RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 ACMSDQ8TDX5 336 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 ZNF721Q8TF20 911 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 C16orf78Q8WTQ4 265 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 TM4SF18Q96CE8 201 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 PPP1R36Q96LQ0 422 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 DOHHQ9BU89 302 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 PTGES2Q9H7Z7 377 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 EML4Q9HC35 981 aaKnown RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 BOKQ9UMX3 212 aaPredicted RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 STK38LQ9Y2H1 464 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 POLR3HQ9Y535 204 aaPredicted RBP3.18□□□□□ -1.9
HTT-210ENST00000512909 APC2O95996 2303 aa3.18□□□□□ -1.9
HTT-210ENST00000512909 EPG5Q9HCE0 2579 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 TRGV5A0A0B4J1U4 118 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 PINLYPA6NC86 204 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 CYSRT1A8MQ03 144 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 FCN1O00602 326 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 AZIN1O14977 448 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 PLIN3O60664 434 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 SMPD2O60906 423 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 CDH16O75309 829 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 CD55P08174 381 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 RPS17P08708 135 aaKnown RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 STSP08842 583 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 CT62P0C5K7 136 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 CCL3P10147 92 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 GCAP28676 217 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ALDH3A1P30838 453 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms