RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NOS3P29474 1203 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 CFHR2P36980 270 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 DDOSTP39656 456 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.44□□□□□ -0.74
VEGFA-216ENST00000512683 PPP1R8Q12972 351 aaKnown RBP10.44□□□□□ -0.74
VEGFA-216ENST00000512683 LCN8Q6JVE9 175 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 FIP1L1Q6UN15 594 aaKnown RBP10.44□□□□□ -0.74
VEGFA-216ENST00000512683 NAA40Q86UY6 237 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 LINC00346Q8IVM7 164 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 BHLHE23Q8NDY6 225 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 NPRL2Q8WTW4 380 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 WFDC12Q8WWY7 111 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 SLCO4A1Q96BD0 722 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 MAP6Q96JE9 813 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 WDFY2Q96P53 400 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 MMP27Q9H306 513 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 ACOXLQ9NUZ1 547 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 C1RLQ9NZP8 487 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 KAAG1Q9UBP8 84 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 CDH10Q9Y6N8 788 aa10.44□□□□□ -0.74
VEGFA-216ENST00000512683 CD300LBA8K4G0 201 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 GPR37O15354 613 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 FAM20BO75063 409 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 FAM107AO95990 144 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 HLA-DPB1P04440 258 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 MELTFP08582 738 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 PSKH1P11801 424 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 MMP9P14780 707 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 ZNF823P16415 610 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 PYCR1P32322 319 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 TRAP1Q12931 704 aaKnown RBP10.43□□□□□ -0.74
VEGFA-216ENST00000512683 TRIM25Q14258 630 aaKnown RBP10.43□□□□□ -0.74
VEGFA-216ENST00000512683 OR8G1Q15617 311 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 MIDNQ504T8 468 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 METTL11BQ5VVY1 283 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 DRAM2Q6UX65 266 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 LYPD2Q6UXB3 125 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 BRD3OSQ6XYD6 125 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 RASSF6Q6ZTQ3 369 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 MRPL21Q7Z2W9 205 aaKnown RBP10.43□□□□□ -0.74
VEGFA-216ENST00000512683 ARHGAP24Q8N264 748 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 LINC00471Q8N535 108 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 KIR3DL3Q8N743 410 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 CYB561A3Q8NBI2 242 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 CHIAQ9BZP6 476 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 DPAGT1Q9H3H5 408 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 MAGIXQ9H6Y5 334 aa10.43□□□□□ -0.74
VEGFA-216ENST00000512683 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-216ENST00000512683 CENPVL3A0A0U1RRI6 287 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 C22orf46C9J442 243 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 M0R135 149 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 CLPXO76031 633 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 ANOS1P23352 680 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 OMGP23515 440 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 OTX1P32242 354 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-216ENST00000512683 GRK5P34947 590 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 PRSS12P56730 875 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 FAM201AQ5SY85 155 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 RPL13AP3Q6NVV1 102 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 LYPD4Q6UWN0 246 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 GDPGP1Q6ZNW5 385 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 DHFR2Q86XF0 187 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 LDLRAD3Q86YD5 345 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 LNX2Q8N448 690 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 AQP11Q8NBQ7 271 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 OR52L1Q8NGH7 329 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 LRTOMTQ8WZ04 291 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 ZNF799Q96GE5 643 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 TECTBQ96PL2 329 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 PCGF1Q9BSM1 259 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 MUC13Q9H3R2 512 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 CNTD2Q9H8S5 307 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 SP140LQ9H930 580 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 WDR76Q9H967 626 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 RNPEPL1Q9HAU8 725 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 C14orf119Q9NWQ9 140 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 TAS2R1Q9NYW7 299 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 CAB39Q9Y376 341 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-216ENST00000512683 SOX21Q9Y651 276 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-216ENST00000512683 KPTNQ9Y664 436 aa10.42□□□□□ -0.74
VEGFA-216ENST00000512683 IGHV1-69DA0A0B4J2H0 117 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 OOEPA6NGQ2 149 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 GGT3PA6NGU5 568 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 ADAM20O43506 726 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 CCNB2O95067 398 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 LHBP01229 141 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 IGHV1-69P01742 117 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 HLA-DQA2P01906 255 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 MUC1P15941 1255 aaPredicted RBP10.41□□□□□ -0.74
VEGFA-216ENST00000512683 CALB2P22676 271 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 CA6P23280 308 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 RPS27P42677 84 aaKnown RBP10.41□□□□□ -0.74
VEGFA-216ENST00000512683 MPPED2Q15777 294 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 SNCBQ16143 134 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 MICAQ29983 383 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 OR2T5Q6IEZ7 315 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 SLC37A3Q8NCC5 494 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 CCDC197Q8NCU1 140 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 OR51L1Q8NGJ5 315 aa10.41□□□□□ -0.74
VEGFA-216ENST00000512683 OR9Q1Q8NGQ5 310 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms