RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 DVL3Q92997 716 aaPredicted RBP13.44□□□□□ -0.26
DDX41-214ENST00000512334 SPSB4Q96A44 273 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 SGK3Q96BR1 496 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 ADAT1Q9BUB4 502 aaKnown RBP13.44□□□□□ -0.26
DDX41-214ENST00000512334 SLC22A4Q9H015 551 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 ZNF665Q9H7R5 613 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 NIPAL2Q9H841 368 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 LPAR2Q9HBW0 351 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 GCM1Q9NP62 436 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 UBAP1Q9NZ09 502 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 IKZF2Q9UKS7 526 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 NOP16Q9Y3C1 178 aaKnown RBP13.44□□□□□ -0.26
DDX41-214ENST00000512334 NPTNQ9Y639 398 aa13.44□□□□□ -0.26
DDX41-214ENST00000512334 ANKRD30BLA7E2S9 258 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 B4DSR2 109 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 FAM157AC9JC47 383 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 ZNF670-ZNF695F2Z2N8 137 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 SBK2P0C263 348 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 CFL1P23528 166 aaKnown RBP13.43□□□□□ -0.26
DDX41-214ENST00000512334 MMP16P51512 607 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 PSMA6P60900 246 aaKnown RBP13.43□□□□□ -0.26
DDX41-214ENST00000512334 CXCR4P61073 352 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 CHRFAM7AQ494W8 412 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 MALRD1Q5VYJ5 2156 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 ZBTB49Q6ZSB9 765 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 MOGAT3Q86VF5 341 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 OR51G2Q8NGK0 314 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 ASB17Q8WXJ9 295 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 EME1Q96AY2 570 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 RAB39BQ96DA2 213 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 ADGRL4Q9HBW9 690 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 MRPL15Q9P015 296 aaKnown RBP13.43□□□□□ -0.26
DDX41-214ENST00000512334 ZNF319Q9P2F9 582 aa13.43□□□□□ -0.26
DDX41-214ENST00000512334 WARS2Q9UGM6 360 aaKnown RBP13.43□□□□□ -0.26
DDX41-214ENST00000512334 ANK3Q12955 4377 aaKnown RBP13.43□□□□□ -0.26
DDX41-214ENST00000512334 PHYHO14832 338 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 HTR1FP30939 366 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 ATP6V1E1P36543 226 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 DDOSTP39656 456 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 RIDAP52758 137 aaKnown RBP13.42□□□□□ -0.26
DDX41-214ENST00000512334 LMO4P61968 165 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 BTG1P62324 171 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 FAM3AP98173 230 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 PRAMEF6Q5VXH4 476 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 DEGS2Q6QHC5 323 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 ZNF679Q8IYX0 411 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 RFLNBQ8N5W9 214 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 HRASLS5Q96KN8 279 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 OR8B4Q96RC9 309 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 MNTQ99583 582 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 TBX5Q99593 518 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 SHARPINQ9H0F6 387 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 RGCCQ9H4X1 137 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 CLN6Q9NWW5 311 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 HAO2Q9NYQ3 351 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 CDC42EP3Q9UKI2 254 aa13.42□□□□□ -0.26
DDX41-214ENST00000512334 SONP18583 2426 aaKnown RBP13.42□□□□□ -0.26
DDX41-214ENST00000512334 NF1P21359 2839 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 NIPBLQ6KC79 2804 aaeCLIP13.41□□□□□ -0.26
DDX41-214ENST00000512334 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.41□□□□□ -0.26
DDX41-214ENST00000512334 hCG_38984A0A1B0GV85 526 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 TMEM269A0A1B0GVZ9 245 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 A0A1B0GWJ7 208 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 PRR32B1ATL7 298 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 TMEM178BH3BS89 294 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 IFNL4K9M1U5 179 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 GMDSO60547 372 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 ZNF254O75437 659 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 APOL3O95236 402 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 CYB5R3P00387 301 aaPredicted RBP13.41□□□□□ -0.26
DDX41-214ENST00000512334 IGHV2-70P01814 119 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 IRF2P14316 349 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 ANPEPP15144 967 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 CD200P41217 278 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 GSK3AP49840 483 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 POU4F2Q12837 409 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 MAB21L1Q13394 359 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 ZNF322Q6U7Q0 402 aaPredicted RBP13.41□□□□□ -0.26
DDX41-214ENST00000512334 GLCCI1Q86VQ1 547 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 COMMD2Q86X83 199 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 OR8B12Q8NGG6 310 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 TRUB1Q8WWH5 349 aaKnown RBP13.41□□□□□ -0.26
DDX41-214ENST00000512334 RFKQ969G6 155 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 UBE2FQ969M7 185 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 C1orf159Q96HA4 380 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 SIGLEC11Q96RL6 698 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 MBOAT4Q96T53 435 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 SLC29A1Q99808 456 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 BEX2Q9BXY8 128 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 UFSP2Q9NUQ7 469 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 TMEM160Q9NX00 188 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 PCDHB10Q9UN67 800 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 GTF2A1LQ9UNN4 478 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 GMPPBQ9Y5P6 360 aa13.41□□□□□ -0.26
DDX41-214ENST00000512334 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■■■■□ 25.5
DDX41-214ENST00000512334 ABCA2Q9BZC7 2435 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 LRRC30A6NM36 301 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 ANKRD65E5RJM6 399 aa13.4□□□□□ -0.26
DDX41-214ENST00000512334 MAGEB4O15481 346 aaPredicted RBP13.4□□□□□ -0.26
DDX41-214ENST00000512334 ZNF205O95201 554 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms