RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PPP1R3DO95685 299 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 TFF1P04155 84 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 LCATP04180 440 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 CDKN2AP42771 156 aaKnown RBP15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 KRTAP10-11P60412 298 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 ZNF92Q03936 586 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 SNAI3Q3KNW1 292 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 ANKDD1AQ495B1 522 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 ZBED5Q49AG3 693 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 CYBRD1Q53TN4 286 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 NANOGP8Q6NSW7 305 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 C11orf88Q6PI97 169 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 PLPP7Q8NBV4 271 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 OR2AE1Q8NHA4 323 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 WWC2-AS2Q96NR7 200 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 CITED2Q99967 270 aaPredicted RBP15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 SERTAD4Q9NUC0 356 aa15.47■□□□□ 0.07
HMGCS1-206ENST00000511774 IGLV1-36A0A0B4J1U3 117 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 A6NLC8 198 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 ACOT8O14734 319 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 GMDSO60547 372 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 UBE2E1P51965 193 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 FXYD6P3P58550 94 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 TRAP1Q12931 704 aaKnown RBP15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 SLC18B1Q6NT16 456 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 OFCC1Q8IZS5 231 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 SPERTQ8NA61 448 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 DCTN5Q9BTE1 182 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 ZNF702PQ9H963 129 aa15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 PRPF19Q9UMS4 504 aaKnown RBP15.46■□□□□ 0.07
HMGCS1-206ENST00000511774 SACSQ9NZJ4 4579 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 hCG_1807616A0A1W2PRN6 198 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 ANGPT2O15123 496 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 PTP4A3O75365 173 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 SDHAP31040 664 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 CENPAP49450 140 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 MAGOHP61326 146 aaKnown RBP15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 IKZF1Q13422 519 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 MRPL21Q7Z2W9 205 aaKnown RBP15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 NDUFA11Q86Y39 141 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 C8orf46Q8TAG6 207 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 PIFOQ8TCI5 191 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 ACOT11Q8WXI4 607 aaPredicted RBP15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 RANBP3Q9H6Z4 567 aaPredicted RBP15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 NRIP3Q9NQ35 241 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 NKIRAS1Q9NYS0 192 aa15.45■□□□□ 0.06
HMGCS1-206ENST00000511774 FXYD1O00168 92 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 MDH1P40925 334 aaKnown RBP15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 EMX1Q04741 257 aaPredicted RBP15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 MALLQ13021 153 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 LRRC23Q53EV4 343 aaPredicted RBP15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 TMPRSS11FQ6ZWK6 438 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 MBOAT2Q6ZWT7 520 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 VTCN1Q7Z7D3 282 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 CMTM4Q8IZR5 234 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 WFDC9Q8NEX5 89 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 SLC26A10Q8NG04 563 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 LRRC29Q8WV35 223 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 TPD52L3Q96J77 140 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 CLPTM1LQ96KA5 538 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 PITX2Q99697 317 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 ATF6BQ99941 703 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 SLC22A4Q9H015 551 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 SIGLEC7Q9Y286 467 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 IER3IP1Q9Y5U9 82 aa15.44■□□□□ 0.06
HMGCS1-206ENST00000511774 MSX2P35548 267 aaPredicted RBP15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 TGM4P49221 684 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 CSNK2BP67870 215 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 TRAM2Q15035 370 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 DEFB121Q5J5C9 76 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 GLYATL3Q5SZD4 288 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 OR4F17Q8NGA8 305 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 SLC7A13Q8TCU3 470 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 TLCD1Q96CP7 247 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 DMRTB1Q96MA1 342 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 OR4F4Q96R69 305 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 PPP1R3EQ9H7J1 279 aa15.43■□□□□ 0.06
HMGCS1-206ENST00000511774 DNAH7Q8WXX0 4024 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 KDELR2P33947 212 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 GGT2P36268 569 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 BMXP51813 675 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 ACSM1Q08AH1 577 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 LRRC75BQ2VPJ9 315 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 GPR139Q6DWJ6 353 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 ZNF730Q6ZMV8 503 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 TSEN54Q7Z6J9 526 aaKnown RBP15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 RNF113BQ8IZP6 322 aaKnown RBP15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 OR6V1Q8N148 313 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 LNX2Q8N448 690 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 OR5T2Q8NGG2 359 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 OR56B2PQ8NGI1 322 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 H1FXQ92522 213 aaKnown RBP15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 FAM46AQ96IP4 442 aaKnown RBP15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 MAP6Q96JE9 813 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 GPX7Q96SL4 187 aaPredicted RBP15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 NKX3-1Q99801 234 aaPredicted RBP15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 FNDC11Q9BVV2 318 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 PARD6BQ9BYG5 372 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 MEGF9Q9H1U4 602 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 MRPL15Q9P015 296 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms