RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LINC01356Q8N9X3 169 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 ZNF420Q8TAQ5 688 aaPredicted RBP11.8□□□□□ -0.52
DDX41-212ENST00000511040 STMN2Q93045 179 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 SPSB4Q96A44 273 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 MBOAT4Q96T53 435 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 C9orf16Q9BUW7 83 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 OR10A2Q9H208 303 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 GCM1Q9NP62 436 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 IMPAD1Q9NX62 359 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 PPP1R3CQ9UQK1 317 aa11.8□□□□□ -0.52
DDX41-212ENST00000511040 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
DDX41-212ENST00000511040 NIPBLQ6KC79 2804 aaeCLIP11.8□□□□□ -0.52
DDX41-212ENST00000511040 ABCA2Q9BZC7 2435 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 LMX1BO60663 402 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 CRLF1O75462 422 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 ZNF205O95201 554 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 CYB5R3P00387 301 aaPredicted RBP11.79□□□□□ -0.52
DDX41-212ENST00000511040 RAD23AP54725 363 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 CDH15P55291 814 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 PSMA6P60900 246 aaKnown RBP11.79□□□□□ -0.52
DDX41-212ENST00000511040 CDC42P60953 191 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 FAM3AP98173 230 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 SLC3A1Q07837 685 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 ZBTB49Q6ZSB9 765 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 IL17RELQ6ZVW7 336 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 RHOUQ7L0Q8 258 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 PEG10Q86TG7 708 aaKnown RBP11.79□□□□□ -0.52
DDX41-212ENST00000511040 OR8B12Q8NGG6 310 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 OR52H1Q8NGJ2 320 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 OR51G2Q8NGK0 314 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 EME1Q96AY2 570 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 TBX5Q99593 518 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 GAL3ST1Q99999 423 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 APOL4Q9BPW4 351 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 ADAT1Q9BUB4 502 aaKnown RBP11.79□□□□□ -0.52
DDX41-212ENST00000511040 SP140LQ9H930 580 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 UBAP1Q9NZ09 502 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 AASSQ9UDR5 926 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 IKZF2Q9UKS7 526 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 KCNS2Q9ULS6 477 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 NPTNQ9Y639 398 aa11.79□□□□□ -0.52
DDX41-212ENST00000511040 A0A1B0GWJ7 208 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 HTR1FP30939 366 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 PMELP40967 661 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 GSK3AP49840 483 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 CXCR4P61073 352 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 MAB21L1Q13394 359 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 KCTD18Q6PI47 426 aaPredicted RBP11.78□□□□□ -0.52
DDX41-212ENST00000511040 ZNF322Q6U7Q0 402 aaPredicted RBP11.78□□□□□ -0.52
DDX41-212ENST00000511040 OR8J1Q8NGP2 316 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 ASB17Q8WXJ9 295 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 LYZL4Q96KX0 146 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 OR8B4Q96RC9 309 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 SIGLEC11Q96RL6 698 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 PPP1R3EQ9H7J1 279 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 ZNF665Q9H7R5 613 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 UFSP2Q9NUQ7 469 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 WARS2Q9UGM6 360 aaKnown RBP11.78□□□□□ -0.52
DDX41-212ENST00000511040 TMEM14AQ9Y6G1 99 aa11.78□□□□□ -0.52
DDX41-212ENST00000511040 hCG_38984A0A1B0GV85 526 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 TMEM269A0A1B0GVZ9 245 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 ANKRD30BLA7E2S9 258 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 ZNF670-ZNF695F2Z2N8 137 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 TMEM178BH3BS89 294 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 ENTPD6O75354 484 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 IGHV2-70P01814 119 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 IGHV2-5P01817 119 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 HOXA4Q00056 320 aaPredicted RBP11.77□□□□□ -0.53
DDX41-212ENST00000511040 ROM1Q03395 351 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 MFGE8Q08431 387 aaPredicted RBP11.77□□□□□ -0.53
DDX41-212ENST00000511040 ZMYND11Q15326 602 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 MPPED2Q15777 294 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 PLEKHG7Q6ZR37 379 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 SSX6Q7RTT6 188 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 ZNF679Q8IYX0 411 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 OR10H4Q8NGA5 316 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 PPP1R14AQ96A00 147 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 C1orf159Q96HA4 380 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 HRASLS5Q96KN8 279 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 MROQ9BYG7 248 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 OPA3Q9H6K4 179 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 NIPAL2Q9H841 368 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 CLN6Q9NWW5 311 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 FAM206AQ9NX38 181 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 HAO2Q9NYQ3 351 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 MRPL15Q9P015 296 aaKnown RBP11.77□□□□□ -0.53
DDX41-212ENST00000511040 RHBDD3Q9Y3P4 386 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 GMPPBQ9Y5P6 360 aa11.77□□□□□ -0.53
DDX41-212ENST00000511040 B4DSR2 109 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 E9PQ18 207 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 FAM20BO75063 409 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 GRPP07492 148 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 CFL1P23528 166 aaKnown RBP11.76□□□□□ -0.53
DDX41-212ENST00000511040 ATP6V1E1P36543 226 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 CD200P41217 278 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 RIDAP52758 137 aaKnown RBP11.76□□□□□ -0.53
DDX41-212ENST00000511040 BTG1P62324 171 aa11.76□□□□□ -0.53
DDX41-212ENST00000511040 RCN1Q15293 331 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms