RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ABHD6Q9BV23 337 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 UFSP2Q9NUQ7 469 aa14.99□□□□□ -0.01
TPM3-220ENST00000509601 MRPL15Q9P015 296 aaKnown RBP14.99□□□□□ -0.01
TPM3-220ENST00000509601 TCRBV3S1A0A5B6 114 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 ZNF878C9JN71 531 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 GYG2O15488 501 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 OSMP13725 252 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 RPS2P15880 293 aaKnown RBP14.98□□□□□ -0.01
TPM3-220ENST00000509601 POU1F1P28069 291 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 ZNF841Q6ZN19 808 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 ERI1Q8IV48 349 aaKnown RBP14.98□□□□□ -0.01
TPM3-220ENST00000509601 ZDHHC22Q8N966 263 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 FAM216AQ8WUB2 273 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 NEIL1Q96FI4 390 aaPredicted RBP14.98□□□□□ -0.01
TPM3-220ENST00000509601 INTS14Q96SY0 518 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 SSBP3Q9BWW4 388 aaPredicted RBP14.98□□□□□ -0.01
TPM3-220ENST00000509601 OR51V1Q9H2C8 321 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 NTN4Q9HB63 628 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 ESM1Q9NQ30 184 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 ZNF319Q9P2F9 582 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 POMPQ9Y244 141 aa14.98□□□□□ -0.01
TPM3-220ENST00000509601 TNFRSF13BO14836 293 aaPredicted RBP14.97□□□□□ -0.01
TPM3-220ENST00000509601 FKBP6O75344 327 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 IRF2P14316 349 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 HOXB6P17509 224 aaKnown RBP14.97□□□□□ -0.01
TPM3-220ENST00000509601 FPR2P25090 351 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 SLC15A1P46059 708 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 GRB2P62993 217 aaKnown RBP14.97□□□□□ -0.01
TPM3-220ENST00000509601 FAM3AP98173 230 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 FLOT2Q14254 428 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 DNAL1Q4LDG9 190 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 RHOUQ7L0Q8 258 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 SPATA24Q86W54 205 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 PLPP7Q8NBV4 271 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 OR56B2PQ8NGI1 322 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 OR11L1Q8NGX0 322 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 OR6N2Q8NGY6 317 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 RAB40AQ8WXH6 277 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 OTULINQ96BN8 352 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 ZMYND19Q96E35 227 aaPredicted RBP14.97□□□□□ -0.01
TPM3-220ENST00000509601 SUCNR1Q9BXA5 334 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 TOR3AQ9H497 397 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 RNF7Q9UBF6 113 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 ZNF69Q9UC07 566 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 NUP50Q9UKX7 468 aa14.97□□□□□ -0.01
TPM3-220ENST00000509601 KIR2DS1A0A191URI9 304 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 GSC2O15499 205 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 XRCC2O43543 280 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 HMGN1P05114 100 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 ANXA8P13928 327 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 DDOSTP39656 456 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 PSMB10P40306 273 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 OPRL1P41146 370 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 CX3CR1P49238 355 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 CBX1P83916 185 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 KLHL12Q53G59 568 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 PLBD1Q6P4A8 553 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 DCDC5Q6ZRR9 648 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 SHFQ7M4L6 423 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 SLC16A9Q7RTY1 509 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 C11orf53Q8IXP5 236 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 BCL6BQ8N143 479 aaPredicted RBP14.96□□□□□ -0.01
TPM3-220ENST00000509601 BPIFB2Q8N4F0 458 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 SPERTQ8NA61 448 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 ADAT1Q9BUB4 502 aaKnown RBP14.96□□□□□ -0.01
TPM3-220ENST00000509601 CADM1Q9BY67 442 aaKnown RBP14.96□□□□□ -0.01
TPM3-220ENST00000509601 FN3KRPQ9HA64 309 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 DNAJB9Q9UBS3 223 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 OR5V1Q9UGF6 321 aa14.96□□□□□ -0.01
TPM3-220ENST00000509601 NOP16Q9Y3C1 178 aaKnown RBP14.96□□□□□ -0.01
TPM3-220ENST00000509601 NBEAL1Q6ZS30 2694 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 IGHV2-70DA0A0C4DH43 119 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 TMEM89A2RUT3 159 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 PRR23D1E9PI22 279 aaPredicted RBP14.95□□□□□ -0.02
TPM3-220ENST00000509601 TRIM77I1YAP6 450 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 TBX1O43435 398 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 DNAJC8O75937 253 aaPredicted RBP14.95□□□□□ -0.02
TPM3-220ENST00000509601 ANXA2P07355 339 aaKnown RBP14.95□□□□□ -0.02
TPM3-220ENST00000509601 PRR23D2P0DMB1 279 aaPredicted RBP14.95□□□□□ -0.02
TPM3-220ENST00000509601 GNB2P62879 340 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 TMEM236Q5W0B7 351 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 WDR25Q64LD2 544 aaPredicted RBP14.95□□□□□ -0.02
TPM3-220ENST00000509601 ZNF826PQ6ZT77 177 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 CPOQ8IVL8 374 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 JMJD8Q96S16 334 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 MRI1Q9BV20 369 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 OPA3Q9H6K4 179 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 PPP1R3EQ9H7J1 279 aa14.95□□□□□ -0.02
TPM3-220ENST00000509601 SELENOFO60613 162 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 E2F6O75461 281 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 LHBP01229 141 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 PPIAL4GP0DN37 164 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 PAICSP22234 425 aaKnown RBP14.94□□□□□ -0.02
TPM3-220ENST00000509601 SLC2A5P22732 501 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 HSD11B1P28845 292 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 PITPNBP48739 271 aa14.94□□□□□ -0.02
TPM3-220ENST00000509601 COMPP49747 757 aaPredicted RBP14.94□□□□□ -0.02
TPM3-220ENST00000509601 ZNF121P58317 390 aaPredicted RBP14.94□□□□□ -0.02
TPM3-220ENST00000509601 SFRP4Q6FHJ7 346 aaPredicted RBP14.94□□□□□ -0.02
TPM3-220ENST00000509601 LRRN1Q6UXK5 716 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms