RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 MEIKINA0A087WXM9 373 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 KLF18A0A0U1RQI7 1052 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 KIR2DS1A0A191URI9 304 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CIB4A0PJX0 185 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CLDN24A6NM45 220 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 C17orf105B2RV13 164 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 NPIPB11E5RHQ5 1161 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 M0QYG6 137 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CORTO00230 105 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ARPC1BO15143 372 aaKnown RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CCL25O15444 150 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 NKX2-8O15522 239 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 PPIHO43447 177 aaKnown RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 MPZL2O60487 215 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ENTPD6O75354 484 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 FOXH1O75593 365 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ATG12O94817 140 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 TOMM40O96008 361 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 IGKV5-2P06315 115 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 SBK3P0C264 359 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF17P17021 662 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF182P17025 639 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 GM2AP17900 193 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 MATN1P21941 496 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CERS1P27544 350 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 GPR1P46091 355 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CDX1P47902 265 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 TMEM50BP56557 158 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 PIGPP57054 158 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 LINC00205P59089 165 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 TAS2R43P59537 309 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 HILS1P60008 231 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 NTHL1P78549 312 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ROM1Q03395 351 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 GPR17Q13304 367 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 IL13RA2Q14627 380 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 KIR2DS1Q14954 304 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 SLC10A1Q14973 349 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 QPRTQ15274 297 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 GABRA6Q16445 453 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 RPEL1Q2QD12 228 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 GGTA1PQ4G0N0 100 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ELFN2Q5R3F8 820 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 C16orf89Q6UX73 402 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 Q6ZSR9 355 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 MBOAT2Q6ZWT7 520 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ASCL5Q7RTU5 278 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 GLT6D1Q7Z4J2 308 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 HSD17B13Q7Z5P4 300 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CROCCP2Q86T23 111 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CCDC190Q86UF4 302 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 PDSS2Q86YH6 399 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 SNX29P2Q8IUI4 249 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 TCTE3Q8IZS6 198 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 LRRC25Q8N386 305 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF676Q8N7Q3 588 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 OR4E2Q8NGC2 313 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 OR56A4Q8NGH8 313 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 OR10V1Q8NGI7 309 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 OR6K2Q8NGY2 324 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 OR13G1Q8NGZ3 307 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 OR56B4Q8NH76 319 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 OR1F12Q8NHA8 337 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 SYNPRQ8TBG9 265 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 RNF138Q8WVD3 245 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 XAGE5Q8WWM1 108 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ASB13Q8WXK3 278 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 SCRN2Q96FV2 425 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 P2RY11Q96G91 374 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 KAZALD1Q96I82 304 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 KCTD7Q96MP8 289 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 LINC00052Q96N35 136 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CPXM1Q96SM3 734 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 P2RX4Q99571 388 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 FOXB1Q99853 325 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 CMSS1Q9BQ75 279 aaKnown RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 C20orf144Q9BQM9 153 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 TMEM39BQ9GZU3 492 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 NXF5Q9H1B4 397 aaKnown RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 Q9H521 79 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 RNF122Q9H9V4 155 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 EFCAB1Q9HAE3 211 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 PATZ1Q9HBE1 687 aaKnown RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ADGRL4Q9HBW9 690 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 SPANXB1Q9NS25 103 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 LANCL2Q9NS86 450 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF107Q9UII5 783 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 PPP2R2CQ9Y2T4 447 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 ABCA3Q99758 1704 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 SHANK3Q9BYB0 1731 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 YLPM1P49750 1951 aaKnown RBP3.94□□□□□ -1.78
NIPBL-206ENST00000509429 DISP2A7MBM2 1401 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 RIC1Q4ADV7 1423 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 TNS2Q63HR2 1409 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 TNS3Q68CZ2 1445 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 BCORQ6W2J9 1755 aa3.94□□□□□ -1.78
NIPBL-206ENST00000509429 MYH6P13533 1939 aa3.93□□□□□ -1.78
NIPBL-206ENST00000509429 NHSL1Q5SYE7 1610 aa3.93□□□□□ -1.78
NIPBL-206ENST00000509429 CICQ96RK0 1608 aaPredicted RBP3.93□□□□□ -1.78
NIPBL-206ENST00000509429 A0A0B4J2E0 115 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms