RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 ZNF841Q6ZN19 808 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 Q6ZR03 302 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 RFPL4BQ6ZWI9 263 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 BOLLQ8N9W6 283 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 SPERTQ8NA61 448 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 PCYOX1LQ8NBM8 494 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR8B3Q8NGG8 313 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 LRRC8CQ8TDW0 803 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 ITLN1Q8WWA0 313 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 GTF2H4Q92759 462 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 TAF15Q92804 592 aaKnown RBP eCLIP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 C4orf45Q96LM5 186 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR2V2Q96R30 315 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR8B2Q96RD0 313 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 ZNF347Q96SE7 839 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 TMEM246Q9BRR3 403 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 TMEM109Q9BVC6 243 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 NUF2Q9BZD4 464 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR2H1Q9GZK4 316 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 POLR2J2Q9GZM3 115 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 C20orf27Q9GZN8 174 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 PAIP1Q9H074 479 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 POLR2J3Q9H1A7 115 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 WNT5BQ9H1J7 359 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR51B6Q9H340 312 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 WDR55Q9H6Y2 383 aaPredicted RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 CCNB1IP1Q9NPC3 277 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 SDR39U1Q9NRG7 319 aaPredicted RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 ACOXLQ9NUZ1 547 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 NECAP2Q9NVZ3 263 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 DCAF16Q9NXF7 216 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 GRHPRQ9UBQ7 328 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 CLN8Q9UBY8 286 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 CAB39Q9Y376 341 aaPredicted RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 UGT2A1Q9Y4X1 527 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 TIMM10BQ9Y5J6 103 aa3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 SOX21Q9Y651 276 aaPredicted RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-213ENST00000509112 TRBV5-3A0A0A0MS03 114 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 IGHV1-69DA0A0B4J2H0 117 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 A0A1W2PRG6 482 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SAC3D1A6NKF1 404 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 TRPC5OSA6NMA1 111 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 LRRN3E7EW58 273 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 C11orf98E9PRG8 122 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 G3V4G9 280 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 H0YL77 283 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 HDAC3O15379 428 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 AHCYL1O43865 530 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 PIP5K1CO60331 668 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 TPST1O60507 370 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 PTBP3O95758 552 aaKnown RBP3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 IGHV1-69P01742 117 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 HIST1H2ABP04908 130 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 GPX2P18283 190 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 CCNOP22674 350 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 RBM34P42696 430 aaKnown RBP3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 KIR2DS4P43632 304 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SLC1A6P48664 564 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 RGS6P49758 472 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 FGF12P61328 243 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SCRN3Q0VDG4 424 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SF3A3Q12874 501 aaKnown RBP eCLIP3.57□□□□□ -1.847e-7■■■□□ 18.1
CALCOCO2-213ENST00000509112 MELKQ14680 651 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 NPTX1Q15818 432 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SMN1Q16637 294 aaKnown RBP3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 ANKDD1AQ495B1 522 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 GCNT6Q5T4J0 391 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 TMEM65Q6PI78 240 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SLC2A7Q6PXP3 512 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 BRD3OSQ6XYD6 125 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 HIST3H2AQ7L7L0 130 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 NANOGNBQ7Z5D8 188 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 IGFN1Q86VF2 1251 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 COMTD1Q86VU5 262 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 LRRC18Q8N456 261 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 PNLDC1Q8NA58 520 aaKnown RBP3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 ICA1LQ8NDH6 482 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR8G5Q8NG78 346 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR2Z1Q8NG97 314 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR13G1Q8NGZ3 307 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 OR5R1Q8NH85 324 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 AKR7LQ8NHP1 331 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 FAM110DQ8TAY7 271 aaPredicted RBP3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 UBLCP1Q8WVY7 318 aaPredicted RBP3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 ANP32BQ92688 251 aaKnown RBP3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 HIST1H2ACQ93077 130 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 VPS33AQ96AX1 596 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 RASD2Q96D21 266 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 RITA1Q96K30 269 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 WDFY2Q96P53 400 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 TBX15Q96SF7 602 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 MCHR1Q99705 422 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SIRPDQ9H106 197 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 TXNIPQ9H3M7 391 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 CCDC134Q9H6E4 229 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 RANBP3Q9H6Z4 567 aaPredicted RBP3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 MARCH7Q9H992 704 aa3.57□□□□□ -1.84
CALCOCO2-213ENST00000509112 SEPSECSQ9HD40 501 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms