RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 OR11L1Q8NGX0 322 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 TMEM246Q9BRR3 403 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 ABHD6Q9BV23 337 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 TMEM165Q9HC07 324 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 KIF17Q9P2E2 1029 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 OR5V1Q9UGF6 321 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 PPIAL4AQ9Y536 164 aa12.41□□□□□ -0.42
UBE2D3-228ENST00000508974 A0A1B0GWJ7 208 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 TCRBV3S1A0A5B6 114 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 GPR37O15354 613 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 GRPP07492 148 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 OSMP13725 252 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 CD80P33681 288 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 NAA10P41227 235 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 SLC15A1P46059 708 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 RPS7P62081 194 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 GNB2P62879 340 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 GRB2P62993 217 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 ZNF154Q13106 437 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 TIGD6Q17RP2 521 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 ARMCX4Q5H9R4 360 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 LYPD2Q6UXB3 125 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 FAM57BQ71RH2 274 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 KLBQ86Z14 1044 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 CPOQ8IVL8 374 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 C1orf87Q8N0U7 546 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 BPIFB2Q8N4F0 458 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 TEX29Q8N6K0 151 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 BBS1Q8NFJ9 593 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 SEMA6DQ8NFY4 1073 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 PLEKHA8Q96JA3 519 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 SSBP3Q9BWW4 388 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 CADM1Q9BY67 442 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 YY1AP1Q9H869 796 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 DNAJB9Q9UBS3 223 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 LRCH1Q9Y2L9 728 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 AUP1Q9Y679 476 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 DOCK11Q5JSL3 2073 aa12.4□□□□□ -0.42
UBE2D3-228ENST00000508974 IGHV3OR16-10A0A075B7F0 116 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 GSC2O15499 205 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 XRCC2O43543 280 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 WNT2P09544 360 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 H2BFMP0C1H6 154 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 GATA4P43694 442 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 ZNF121P58317 390 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 ZNF181Q2M3W8 571 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 ZNF404Q494X3 552 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 SFRP4Q6FHJ7 346 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 TIGD4Q8IY51 512 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 THEM6Q8WUY1 208 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 REEP6Q96HR9 211 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 MRI1Q9BV20 369 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 MMADHCQ9H3L0 296 aaPredicted RBP12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 FN3KRPQ9HA64 309 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 C1orf123Q9NWV4 160 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 INSIG2Q9Y5U4 225 aa12.39□□□□□ -0.43
UBE2D3-228ENST00000508974 A6NLC8 198 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 A8MXK9 166 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 GMDSO60547 372 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 LYNP07948 512 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 ANXA8P13928 327 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 ZNF12P17014 697 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 PITPNBP48739 271 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 HCCSP53701 268 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 ACTG1P63261 375 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 CDK5Q00535 292 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 ZNF826PQ6ZT77 177 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 SHFQ7M4L6 423 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 SLC16A9Q7RTY1 509 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 CELF2-AS1Q8N7Q2 184 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 OR8B3Q8NGG8 313 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 RNF133Q8WVZ7 376 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 SGK3Q96BR1 496 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 NEIL1Q96FI4 390 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 PGAM5Q96HS1 289 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 OR8B2Q96RD0 313 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 SLC22A4Q9H015 551 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 TOR3AQ9H497 397 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 PPP1R3EQ9H7J1 279 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 MARCH7Q9H992 704 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 NTN4Q9HB63 628 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 TVP23BQ9NYZ1 205 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 MRPL15Q9P015 296 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 RNF7Q9UBF6 113 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 MIOXQ9UGB7 285 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 KLHDC2Q9Y2U9 406 aa12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 NOP16Q9Y3C1 178 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-228ENST00000508974 A0A0A6YYJ9 748 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 PPIAL4CA0A0B4J2A2 164 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 hCG_1807616A0A1W2PRN6 198 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 ANKRD30BLA7E2S9 258 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 M0R129 80 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 FSHBP01225 129 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 HMGN1P05114 100 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 MRPL3P09001 348 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 HOXB6P17509 224 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 OPRL1P41146 370 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 HILS1P60008 231 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 FAM3AP98173 230 aa12.37□□□□□ -0.43
UBE2D3-228ENST00000508974 APOFQ13790 326 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms