RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CCDC54Q8NEL0 328 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 OR4S1Q8NGB4 309 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 OR4A4PQ8NGN8 299 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 NUBPLQ8TB37 319 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 MARCH1Q8TCQ1 289 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 SLC25A36Q96CQ1 311 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 RAB3CQ96E17 227 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 ARSGQ96EG1 525 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 KIRREL1Q96J84 757 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 TAAR9Q96RI9 348 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 AMELYQ99218 206 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 ELF4Q99607 663 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 CMSS1Q9BQ75 279 aaKnown RBP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 RNF126Q9BV68 326 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 SELENOIQ9C0D9 397 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 SLC5A7Q9GZV3 580 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 CHRNA10Q9GZZ6 450 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 SLC26A1Q9H2B4 701 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 MTIF3Q9H2K0 278 aaKnown RBP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 OR51M1Q9H341 326 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 KCNK15Q9H427 330 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 RGCCQ9H4X1 137 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 ESRP2Q9H6T0 727 aaKnown RBP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 CNTD2Q9H8S5 307 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 UNKLQ9H9P5 680 aaKnown RBP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 UCK1Q9HA47 277 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 PDE7BQ9NP56 450 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 G6PC2Q9NQR9 355 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 CYTL1Q9NRR1 136 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 STARD5Q9NSY2 213 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 MRPL22Q9NWU5 206 aaKnown RBP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 C1orf123Q9NWV4 160 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 LUZP4Q9P127 313 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 COPS7AQ9UBW8 275 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 GPR132Q9UNW8 380 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 DTX4Q9Y2E6 619 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 RAXQ9Y2V3 346 aa4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 STRAPQ9Y3F4 350 aaKnown RBP4.42□□□□□ -1.7
HMGB3P16-201ENST00000508037 LOC100509620A0A075B734 347 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 C5orf52A6NGY3 159 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 COLCA2A8K830 154 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SERPINE3A8MV23 424 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 PRAMEF26H0Y7S4 382 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 H3BSH0 61 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 HRKO00198 91 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 P2RY10O00398 339 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SMAD9O15198 467 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 LRP3O75074 770 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ICOSLGO75144 302 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 NPIPB7O75200 414 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 EIF3GO75821 320 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 IFNA2P01563 188 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 PMP2P02689 132 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SEC11BP0C7V7 166 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 GIMD1P0DJR0 217 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 LIPCP11150 499 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CTSEP14091 401 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ST6GAL1P15907 406 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 MUC1P15941 1255 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CTLA4P16410 223 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ZNF14P17017 642 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 RCC1P18754 421 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 AGAP20933 346 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 RPL12P30050 165 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ZNF93P35789 620 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 PTGFRP43088 359 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 AKR1C2P52895 323 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SUMO3P55854 103 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CLDN6P56747 220 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CD81P60033 236 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 QRFPP83859 136 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 HHEXQ03014 270 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ZNF117Q03924 483 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 AKR1C1Q04828 323 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ZP2Q05996 745 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 PLCXD2Q0VAA5 305 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 GPM6BQ13491 265 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ARFRP1Q13795 201 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 KCNAB1Q14722 419 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 OR7A5Q15622 319 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ELAVL1Q15717 326 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 MST1LQ2TV78 715 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 MOGAT2Q3SYC2 334 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 XP32Q5T750 250 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ASPHD2Q6ICH7 369 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 TANGO2Q6ICL3 276 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ZNF529Q6P280 563 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CBLN3Q6UW01 205 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 BTNL8Q6UX41 500 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CLEC18BQ6UXF7 455 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 Q6ZSR6 202 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SLC29A4Q7RTT9 530 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 DCXRQ7Z4W1 244 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SGPP2Q8IWX5 399 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 POC1AQ8NBT0 407 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SLC26A10Q8NG04 563 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 OR9K2Q8NGE7 335 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms