RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SP5Q6BEB4 398 aaPredicted RBP12.19□□□□□ -0.46
RNF4-208ENST00000507247 VHLLQ6RSH7 139 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 OR5L1Q8NGL2 311 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 LILRB1Q8NHL6 650 aaPredicted RBP12.19□□□□□ -0.46
RNF4-208ENST00000507247 TMEM171Q8WVE6 324 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 FAM71F1Q96KD3 344 aaPredicted RBP12.19□□□□□ -0.46
RNF4-208ENST00000507247 TMED9Q9BVK6 235 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
RNF4-208ENST00000507247 NDUFB11Q9NX14 153 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 FZR1Q9UM11 496 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 ZNF281Q9Y2X9 895 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 SPEF1Q9Y4P9 236 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 ATP23Q9Y6H3 246 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 RAI1Q7Z5J4 1906 aaPredicted RBP12.18□□□□□ -0.46
RNF4-208ENST00000507247 A0A1W2PPR1 153 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 A6NNC1 897 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 E7EQL1 145 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 LMX1BO60663 402 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 COL8A1P27658 744 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 RPL5P46777 297 aaKnown RBP12.18□□□□□ -0.46
RNF4-208ENST00000507247 FAM3AP98173 230 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 MALLQ13021 153 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 INSL4Q14641 139 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 TMEM244Q5VVB8 128 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 RGS7BPQ6MZT1 257 aaPredicted RBP12.18□□□□□ -0.46
RNF4-208ENST00000507247 UNQ6126/PRO20091Q6UXV3 157 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 FBXW12Q6X9E4 464 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 Q6ZSR3 168 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 COMMD2Q86X83 199 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 PLPP7Q8NBV4 271 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 OR13F1Q8NGS4 319 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 OR14K1Q8NGZ2 314 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 KLF14Q8TD94 323 aaPredicted RBP12.18□□□□□ -0.46
RNF4-208ENST00000507247 AKAP1Q92667 903 aaKnown RBP eCLIP12.18□□□□□ -0.46
RNF4-208ENST00000507247 TMEM203Q969S6 136 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 YIPF6Q96EC8 236 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 RGCCQ9H4X1 137 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 CA10Q9NS85 328 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 POU2F3Q9UKI9 436 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 ANKHD1Q8IWZ3 2542 aaKnown RBP12.18□□□□□ -0.46
RNF4-208ENST00000507247 ICE1Q9Y2F5 2266 aa12.18□□□□□ -0.46
RNF4-208ENST00000507247 LRRK2Q5S007 2527 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 A0A1B0GVI7 797 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 SYT7O43581 403 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 COX6B1P14854 86 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 CD53P19397 219 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 ACKR3P25106 362 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 GSK3AP49840 483 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 BLMHQ13867 455 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 OR8B8Q15620 311 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 ALKBH6Q3KRA9 238 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 YIF1BQ5BJH7 314 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 MBNL2Q5VZF2 373 aaKnown RBP12.17□□□□□ -0.46
RNF4-208ENST00000507247 PGAP1Q75T13 922 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 DOK3Q7L591 496 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 MRPL21Q7Z2W9 205 aaKnown RBP12.17□□□□□ -0.46
RNF4-208ENST00000507247 LRP11Q86VZ4 500 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 C1orf174Q8IYL3 243 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 CMBLQ96DG6 245 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 ZNF442Q9H7R0 627 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 ZNF391Q9UJN7 358 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 HHLA2Q9UM44 414 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 V9GYS6 101 aa12.17□□□□□ -0.46
RNF4-208ENST00000507247 USP9YO00507 2555 aaPredicted RBP12.17□□□□□ -0.46
RNF4-208ENST00000507247 TRBV5-5A0A0J9YX44 114 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 FAM221AA4D161 298 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 SC5DO75845 299 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 DHRS3O75911 302 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 RAC2P15153 192 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 ZNF250P15622 560 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 CD36P16671 472 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 TUBG1P23258 451 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 GABRA5P31644 462 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 FABP6P51161 128 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 RPS23P62266 143 aaKnown RBP12.16□□□□□ -0.46
RNF4-208ENST00000507247 FABP5Q01469 135 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 PSG7Q13046 419 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 ADIPOQQ15848 244 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 ZNF718Q3SXZ3 478 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 ZNF672Q499Z4 452 aaPredicted RBP12.16□□□□□ -0.46
RNF4-208ENST00000507247 OR2T2Q6IF00 324 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 TMEM91Q6ZNR0 172 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 SATL1Q86VE3 508 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 OR56B2PQ8NGI1 322 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 GPR148Q8TDV2 347 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 TRMT61AQ96FX7 289 aaKnown RBP12.16□□□□□ -0.46
RNF4-208ENST00000507247 OR14A2Q96R54 314 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 MRPL37Q9BZE1 423 aaKnown RBP12.16□□□□□ -0.46
RNF4-208ENST00000507247 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 OPA3Q9H6K4 179 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 TUBG2Q9NRH3 451 aa12.16□□□□□ -0.46
RNF4-208ENST00000507247 MYEF2Q9P2K5 600 aaKnown RBP12.16□□□□□ -0.46
RNF4-208ENST00000507247 ADGRG4Q8IZF6 3080 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 LOC390937A0A1W2PQ73 354 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 GGT3PA6NGU5 568 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 A6NIN4 97 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 H3BSA7 217 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 GABRPO00591 440 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms