RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TIPRLO75663 272 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 RNASE1P07998 156 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 SPI1P17947 270 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 CA6P23280 308 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 PMELP40967 661 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF92Q03936 586 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 BAMBIQ13145 260 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 AWAT1Q58HT5 328 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 KLF17Q5JT82 389 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 NAA40Q86UY6 237 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 FITM2Q8N6M3 262 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 OR10G2Q8NGC3 310 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 OR8D4Q8NGM9 314 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 OR10S1Q8NGN2 331 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 OR6K6Q8NGW6 343 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 SPSB4Q96A44 273 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 DACT3Q96B18 629 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 CCT8L2Q96SF2 557 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 NUDT16L1Q9BRJ7 211 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 TEX12Q9BXU0 123 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 RGCCQ9H4X1 137 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 ABCB9Q9NP78 766 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 ESM1Q9NQ30 184 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 CENPMQ9NSP4 180 aa12.05□□□□□ -0.48
HMGCS1-203ENST00000507004 POM121CA8CG34 1229 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 ECDO95905 644 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 FAM107AO95990 144 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 PLATP00750 562 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 HSD11B1P28845 292 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 PRKXP51817 358 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 SNAI3Q3KNW1 292 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 GLYATL3Q5SZD4 288 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 GPR157Q5UAW9 335 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 SHISA2Q6UWI4 295 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 CCDC197Q8NCU1 140 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 OR9Q1Q8NGQ5 310 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 GIPC3Q8TF64 312 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 DMRTB1Q96MA1 342 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 INTS14Q96SY0 518 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 YY1AP1Q9H869 796 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 RNPEPL1Q9HAU8 725 aa12.04□□□□□ -0.48
HMGCS1-203ENST00000507004 OOEPA6NGQ2 149 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 DNAJC9-AS1A6NH13 148 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 AQP12BA6NM10 295 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 P2RY10O00398 339 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF205O95201 554 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 HMGN1P05114 100 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 IL13RA1P78552 427 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 TIGD6Q17RP2 521 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 PRAMEF6Q5VXH4 476 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 AQP12AQ8IXF9 295 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF454Q8N9F8 522 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 PNLDC1Q8NA58 520 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF511Q8NB15 262 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 OR56B2PQ8NGI1 322 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 OR51L1Q8NGJ5 315 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 OR4Q3Q8NH05 313 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 OR8S1Q8NH09 359 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 RNF133Q8WVZ7 376 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF747Q9BV97 191 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 OR10A2Q9H208 303 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 MMADHCQ9H3L0 296 aaPredicted RBP12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 NIPAL2Q9H841 368 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF556Q9HAH1 456 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 NOX4Q9NPH5 578 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 UFSP2Q9NUQ7 469 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 ZNF391Q9UJN7 358 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 U3KQV3 271 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 ANK2Q01484 3957 aa12.03□□□□□ -0.48
HMGCS1-203ENST00000507004 TRAV40A0A0B4J280 105 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 IGHV3-64DA0A0J9YX35 117 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 A0A1B0GUS0 222 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 DHRS12A0PJE2 317 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 A6NLC8 198 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 H3BN98 237 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 GNGT2O14610 69 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 GLCEO94923 617 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 SOX14O95416 240 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 CST1P01037 141 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 ANXA2P07355 339 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 MUC1P15941 1255 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 GSTT1P30711 240 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 NAA10P41227 235 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 RPS27P42677 84 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 CX3CR1P49238 355 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 EIF2B1Q14232 305 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 OR8B8Q15620 311 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 MPPED2Q15777 294 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 LINC01590Q5TEZ4 76 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 ZNF841Q6ZN19 808 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 OR6N2Q8NGY6 317 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 OR2AE1Q8NHA4 323 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 TECTBQ96PL2 329 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 PRDM13Q9H4Q3 707 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 MARCH7Q9H992 704 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 ARMC1Q9NVT9 282 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 KAAG1Q9UBP8 84 aa12.02□□□□□ -0.49
HMGCS1-203ENST00000507004 hCG_1807616A0A1W2PRN6 198 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms