RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SERPINB5P36952 375 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 AQP2P41181 271 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CDKN1BP46527 198 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CCR8P51685 355 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 EIF3EP60228 445 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 MYL6P60660 151 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 STXBP1P61764 594 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 RPL10AP62906 217 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 TNNC1P63316 161 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF33AQ06730 810 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 DNAJC3Q13217 504 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 AQP6Q13520 282 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ITIH4Q14624 930 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CLINT1Q14677 625 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 KIAA0087Q14695 138 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 SNRNP35Q16560 246 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 PGGHGQ32M88 737 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 HIKESHIQ53FT3 197 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 LRRC10Q5BKY1 277 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 PAGE3Q5JUK9 113 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CTRB2Q6GPI1 263 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 SPOPLQ6IQ16 392 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 LCN12Q6JVE5 192 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 SPESP1Q6UW49 350 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 TPGS1Q6ZTW0 290 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CMC1Q7Z7K0 106 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM25Q86YD3 366 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CD302Q8IX05 232 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM61Q8N0U2 210 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM86AQ8N2M4 240 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 JAGN1Q8N5M9 183 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 LRRC52Q8N7C0 313 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 PRELID2Q8N945 189 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR2L5Q8NG80 312 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR10G9Q8NGN4 311 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR9G4Q8NGQ1 327 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR2G3Q8NGZ4 309 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 OR5B3Q8NH48 314 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 C2orf15Q8WU43 125 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 NDRG1Q92597 394 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ECHDC3Q96DC8 303 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 TMEM101Q96IK0 257 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ANKRD36BP1Q96IX9 119 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 JSRP1Q96MG2 331 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 RASL11BQ9BPW5 248 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ECSITQ9BQ95 431 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ACBD6Q9BR61 282 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 MED10Q9BTT4 135 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 DEFB127Q9H1M4 99 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 RGCCQ9H4X1 137 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 AGPAT3Q9NRZ7 376 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 AHSPQ9NZD4 102 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CCDC59Q9P031 241 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 SHPKQ9UHJ6 478 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF256Q9Y2P7 627 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 SCN2AQ99250 2005 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 HELZ2Q9BYK8 2649 aaKnown RBP2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 CFAP46Q8IYW2 2715 aa2.3□□□□□ -2.04
TRAPPC11-205ENST00000506426 KIF26AQ9ULI4 1882 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 IGLV3-10A0A075B6K4 115 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 TRAV39A0A0B4J263 110 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 IGKV1D-13A0A0B4J2D9 117 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF816-ZNF321PA0A0X1KG74 233 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 A0A1B0GVI7 797 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 LYRM9A8MSI8 78 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 F6UB75 175 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 KRTAP4-16G5E9R7 235 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 H3BNH8 94 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 H7C0C1 242 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 HDAC3O15379 428 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SRSF10O75494 262 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 LY6G6DO95868 133 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 HPNP05981 417 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 ACSM4P0C7M7 580 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 UBCP0CG48 685 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 IGKV1-13P0DP09 117 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 PRKACAP17612 351 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SYT1P21579 422 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 AK4P27144 223 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 HTR1EP28566 365 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 RBMXP38159 391 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SLC26A3P40879 764 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SLC1A2P43004 574 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 TDGF1P3P51864 188 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SH3BGRP55822 239 aaPredicted RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 MAP3K7CLP57077 242 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 NUP107P57740 925 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 RAB11AP62491 216 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SLC7A9P82251 487 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 IRF8Q02556 426 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 RAD51Q06609 339 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 CYP24A1Q07973 514 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 SMARCB1Q12824 385 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 FZD2Q14332 565 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 TRAM2Q15035 370 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 STK38Q15208 465 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 RAB11BQ15907 218 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 ZNF239Q16600 458 aaKnown RBP2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 CCDC14Q49A88 953 aa2.29□□□□□ -2.04
TRAPPC11-205ENST00000506426 COA6Q5JTJ3 125 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms